RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 LHFPL4Q7Z7J7 247 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 OR4C13Q8NGP0 309 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 OSR1Q8TAX0 266 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 TMED3Q9Y3Q3 217 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 SONP18583 2426 aaKnown RBP11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 A0A1W2PRD5 423 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 A0A1W2PRF3 423 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 A0A1W2PRM7 423 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 HMX3A6NHT5 357 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 AVPP01185 164 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 FSHBP01225 129 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 SULT1A3P0DMM9 295 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 SULT1A4P0DMN0 295 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 IGHV4-38-2P0DP08 117 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 LPAR6P43657 344 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 KLF17Q5JT82 389 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 MOB3BQ86TA1 216 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 LHFPL5Q8TAF8 219 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 ASB13Q8WXK3 278 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 HILPDAQ9Y5L2 63 aa11.74□□□□□ -0.53
NIPAL3-202ENST00000339255 TIMM23O14925 209 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 CRYZL1O95825 349 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 HRASP01112 189 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 VDAC1P21796 283 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 CD1BP29016 333 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 LINC00205P59089 165 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 ERVK-16P61578 105 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 SLC35G3Q8N808 338 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 LSM10Q969L4 123 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 PRR13Q9NZ81 148 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 MGAT4CQ9UBM8 478 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 NUP50Q9UKX7 468 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 FAM96BQ9Y3D0 163 aa11.73□□□□□ -0.53
NIPAL3-202ENST00000339255 A8MV72 311 aaPredicted RBP11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 S1PR2O95136 353 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 FOSL1P15407 271 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 NQO2P16083 231 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 BRS3P32247 399 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 AKR1C2P52895 323 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 KRTAP1-1Q07627 177 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 FCN2Q15485 313 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 BRD3OSQ6XYD6 125 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 FAM219AQ8IW50 185 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 OR5M8Q8NGP6 311 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 RNASE11Q8TAA1 199 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 FLYWCH2Q96CP2 140 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 AJUBAQ96IF1 538 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 SPIN2AQ99865 258 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 SPIN2BQ9BPZ2 258 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 CELSR1Q9NYQ6 3014 aa11.72□□□□□ -0.53
NIPAL3-202ENST00000339255 IGHV3OR16-10A0A075B7F0 116 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 GOSR2O14653 212 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 IGKV1-39P01597 117 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 IGKV1-16P04430 117 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 IGKV1D-39P04432 117 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 FBP1P09467 338 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 POU2AF1Q16633 256 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 TMEM177Q53S58 311 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 C9orf139Q6ZV77 190 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 LYZL2Q7Z4W2 148 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 CFHR4Q92496 578 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 RNF5Q99942 180 aa11.71□□□□□ -0.53
NIPAL3-202ENST00000339255 KRASP01116 189 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 HOXB5P09067 269 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 SLC25A6P12236 298 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 LGALS7P47929 136 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 DYNLT3P51808 116 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 NMSQ5H8A3 153 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 RUSC1-AS1Q66K80 236 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 GSG1LQ6UXU4 331 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 C17orf50Q8WW18 174 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 R3HDM4Q96D70 268 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 SEC22AQ96IW7 307 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 RHOVQ96L33 236 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 HARBI1Q96MB7 349 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 MEGF9Q9H1U4 602 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 HIVEP2P31629 2446 aa11.71□□□□□ -0.54
NIPAL3-202ENST00000339255 FAM90A9PA6NNJ1 464 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 SHOXO15266 292 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 ADAP1O75689 374 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 VENTXO95231 258 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 CXCL3P19876 107 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 HNF1AP20823 631 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 AANATQ16613 207 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 GGNBP1Q5YKI7 109 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 AKAP14Q86UN6 197 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 DYNAPQ8N1N2 210 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 MS4A7Q9GZW8 240 aaPredicted RBP11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 TMEM160Q9NX00 188 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms