RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PRB1P04280 392 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 AGAP20933 346 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 OR2B8PP59922 312 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 SMUG1Q53HV7 270 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 FLNCQ14315 2725 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 MALRD1Q5VYJ5 2156 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 DOCK11Q5JSL3 2073 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 METTL15P1P0C7V9 234 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 DLX1P56177 255 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 PRB3Q04118 309 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 SPANXN5Q5MJ07 72 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 EIF5AL1Q6IS14 154 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 ZDHHC16Q969W1 377 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 ARV1Q9H2C2 271 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 UBTD1Q9HAC8 227 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 HSPB7Q9UBY9 170 aa18.37■□□□□ 0.53
PDLIM2-203ENST00000339162 CDKN1AP38936 164 aa18.36■□□□□ 0.53
PDLIM2-203ENST00000339162 ZNF841Q6ZN19 808 aa18.36■□□□□ 0.53
PDLIM2-203ENST00000339162 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-203ENST00000339162 LPAR3Q9UBY5 353 aa18.36■□□□□ 0.53
PDLIM2-203ENST00000339162 PPIHO43447 177 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 MED6O75586 246 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 TMEM30BQ3MIR4 351 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 TMEM155Q4W5P6 130 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 STX12Q86Y82 276 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 GINS3Q9BRX5 216 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 AKAP6Q13023 2319 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 DLX6P56179 175 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 BAXQ07812 192 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 OR10A7Q8NGE5 316 aa18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 QTRT1Q9BXR0 403 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-203ENST00000339162 TRAV3A0A0B4J244 114 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 FAM90A26D6RGX4 464 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 NDUFS7O75251 213 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 SCO1O75880 301 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 CT45A6P0DMU7 189 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 CT45A5P0DMU8 189 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 CT45A7P0DMV0 189 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 REG1BP48304 166 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 SULT1A1P50225 295 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 TAGLNQ01995 201 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 ARL16Q0P5N6 197 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 SMIM8Q96KF7 97 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 RBFOX2O43251 390 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 THBS3P49746 956 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 DTX2Q86UW9 622 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 C11orf42Q8N5U0 333 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 OR4S2Q8NH73 311 aa18.34■□□□□ 0.53
PDLIM2-203ENST00000339162 NQO2P16083 231 aa18.33■□□□□ 0.53
PDLIM2-203ENST00000339162 SULT1A2P50226 295 aa18.33■□□□□ 0.53
PDLIM2-203ENST00000339162 RPS16P62249 146 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-203ENST00000339162 C1QL1O75973 258 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 FGF2P09038 288 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 SPP1P10451 314 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 DIAPH2-AS1Q14236 149 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 ZNF266Q14584 549 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 HAPLN4Q86UW8 402 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 HRH4Q9H3N8 390 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 TMEM140Q9NV12 185 aa18.33■□□□□ 0.52
PDLIM2-203ENST00000339162 IGKV1-16P04430 117 aa18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 KIR2DS2P43631 304 aa18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 FHITP49789 147 aa18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 ERVK-16P61578 105 aa18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 RUNX1Q01196 453 aa18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 PXDC1Q5TGL8 231 aa18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 LINC00052Q96N35 136 aa18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 BBC3Q96PG8 261 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-203ENST00000339162 IGHV1-8P0DP01 117 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 ATP6V0CP27449 155 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 HSD17B13Q7Z5P4 300 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 OR10X1Q8NGY0 326 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 DTD1Q8TEA8 209 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 ASH1LQ9NR48 2969 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 CEBPZOSA8MTT3 80 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 SEC11BP0C7V7 166 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 OR4A16Q8NH70 328 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 NEU4Q8WWR8 484 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 RHOVQ96L33 236 aa18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 MRPL20Q9BYC9 149 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-203ENST00000339162 A8MXK9 166 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 J3QR06 171 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 IFNA17P01571 189 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 OR8G2PQ6IF36 304 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 TMEM182Q6ZP80 229 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 ZNF833PQ6ZTB9 187 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 ATP5SQ99766 215 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 TRBV23-1A0A0A0MS06 115 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 IGFBP2P18065 325 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 TAS2R30P59541 319 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 AKR1C1Q04828 323 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 Q6ZRG5 221 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 RAB1CQ92928 201 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 TIMD4Q96H15 378 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 ADTRPQ96IZ2 230 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 OR4C12Q96R67 309 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 SESN1Q9Y6P5 492 aa18.3■□□□□ 0.52
PDLIM2-203ENST00000339162 USP9XQ93008 2570 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 F12P00748 615 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 RELBQ01201 579 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 WDR25Q64LD2 544 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms