RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PITX3O75364 302 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 WISP2O76076 250 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 RNF7Q9UBF6 113 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 COLCA2A8K830 154 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 J3QT63 122 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 TNFSF13O75888 250 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 CYB5R3P00387 301 aaPredicted RBP10□□□□□ -0.81
HDAC6-201ENST00000334136 HSPB1P04792 205 aaKnown RBP10□□□□□ -0.81
HDAC6-201ENST00000334136 PTTG1IPP53801 180 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 TGIF2LXQ8IUE1 241 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 H1FOOQ8IZA3 346 aaPredicted RBP10□□□□□ -0.81
HDAC6-201ENST00000334136 SGMS2Q8NHU3 365 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 SSMEM1Q8WWF3 244 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 NABP1Q96AH0 204 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 DMRTA2Q96SC8 542 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 DIRC2Q96SL1 478 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 ATG101Q9BSB4 218 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 ZDHHC8Q9ULC8 765 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 FGF16O43320 207 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 NDUFB3O43676 98 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 MELTFP08582 738 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 PRF1P14222 555 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 UBE2G1P62253 170 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 SSC4DQ8WTU2 575 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 TMEM222Q9H0R3 208 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 SMDT1Q9H4I9 107 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 A0A1W2PPE3 182 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 ZNF729A6NN14 1252 aaPredicted RBP10□□□□□ -0.81
HDAC6-201ENST00000334136 B9A039 149 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 SMPD2O60906 423 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 GYPAP02724 150 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 SLC35B1P78383 322 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 RTN4RL2Q86UN3 420 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 PAQR4Q8N4S7 273 aaPredicted RBP10□□□□□ -0.81
HDAC6-201ENST00000334136 MRGPRDQ8TDS7 321 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 FAM222BQ8WU58 562 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 OR2V2Q96R30 315 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 TP53RKQ96S44 253 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 S1PR3Q99500 378 aa10□□□□□ -0.81
HDAC6-201ENST00000334136 ZNF253O75346 499 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
HDAC6-201ENST00000334136 ADCYAP1P18509 176 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 HIST3H3Q16695 136 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 Q6ZN92 141 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 SLC35E3Q7Z769 313 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 SCCPDHQ8NBX0 429 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 OR4C5Q8NGB2 326 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 ITLN1Q8WWA0 313 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 TMEM230Q96A57 120 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 CLN8Q9UBY8 286 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 AUP1Q9Y679 476 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 NUP210LQ5VU65 1888 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 TNRC6AQ8NDV7 1962 aaKnown RBP9.99□□□□□ -0.81
HDAC6-201ENST00000334136 TRAV38-1A0A0B4J264 116 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 IGHV1-18A0A0C4DH31 117 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 THBS3P49746 956 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 LRRC10Q5BKY1 277 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 KLHDC1Q8N7A1 406 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 TMEM147Q9BVK8 224 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 RPRMQ9NS64 109 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 SLC25A15Q9Y619 301 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 EGR1P18146 543 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 F2RP25116 425 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 G6PCP35575 357 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 RBM11P57052 281 aaKnown RBP9.99□□□□□ -0.81
HDAC6-201ENST00000334136 RANP62826 216 aaKnown RBP9.99□□□□□ -0.81
HDAC6-201ENST00000334136 MEF2BQ02080 365 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-201ENST00000334136 OR5D13Q8NGL4 314 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 OR10G8Q8NGN5 311 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 OR2W1Q9Y3N9 320 aa9.99□□□□□ -0.81
HDAC6-201ENST00000334136 TMEM210A6NLX4 147 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 CCKARP32238 428 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 CAMPP49913 170 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 PAX5Q02548 391 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 TMEM187Q14656 261 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 CEACAM21Q3KPI0 293 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 OR1P1Q8NH06 330 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 ACY3Q96HD9 319 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 C1QTNF5Q9BXJ0 243 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 IER3P46695 156 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 Q8WTZ3 238 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 F8VVB4 439 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 F8VWA3 439 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 IGFBP3P17936 291 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-201ENST00000334136 CNN1P51911 297 aaKnown RBP9.98□□□□□ -0.81
HDAC6-201ENST00000334136 ARSJQ5FYB0 599 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-201ENST00000334136 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 RBKSQ9H477 322 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 COA4Q9NYJ1 87 aa9.98□□□□□ -0.81
HDAC6-201ENST00000334136 LOC102724200A0A096LPH7 203 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-201ENST00000334136 IGSF23A1L1A6 192 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 TOX4O94842 621 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 NPBWR2P48146 333 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 TDGF1P3P51864 188 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 MRPL54Q6P161 138 aaKnown RBP9.97□□□□□ -0.81
HDAC6-201ENST00000334136 SSUH2Q9Y2M2 353 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 TMEM30CPA0ZSE6 113 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 SNRPCP09234 159 aaKnown RBP9.97□□□□□ -0.81
HDAC6-201ENST00000334136 NTF4P34130 210 aa9.97□□□□□ -0.81
HDAC6-201ENST00000334136 GLIPR1P48060 266 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms