RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TGIF2LYQ8IUE0 185 aa13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 VDAC1P21796 283 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM3BP58499 235 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 ARSJQ5FYB0 599 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 CYP2G1PQ6ZSU1 146 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 CENPVQ7Z7K6 275 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 KLF14Q8TD94 323 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 P2RX4Q99571 388 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 CLEC18AA5D8T8 446 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 J3QT63 122 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 IGKV1D-33P01593 117 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 IGKV1-33P01594 117 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 IGHV3-13P01766 116 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 IGHV3-7P01780 117 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 SRPXP78539 464 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 TESK1Q15569 626 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 VHLLQ6RSH7 139 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 Q6ZRM9 215 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 MRGPRGQ86SM5 289 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF808Q8N4W9 903 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 CLEC18CQ8NCF0 446 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 OR5T1Q8NG75 326 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 OR6C3Q9NZP0 311 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 DUSP13Q9UII6 198 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 NAGKQ9UJ70 344 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 HPRT1P00492 218 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 RPLP1P05386 114 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 IAPPP10997 89 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 HAPLN4Q86UW8 402 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 RFESDQ8TAC1 157 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 SDSLQ96GA7 329 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 PLK3Q9H4B4 646 aa13.06□□□□□ -0.32
SHROOM1-201ENST00000319854 MAP1LC3B2A6NCE7 125 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 KIAA1324LA8MWY0 1029 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 AESQ08117 197 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 SAXO1Q8IYX7 474 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 Q8NFD4 153 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 OR5B12Q96R08 314 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 TBX15Q96SF7 602 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 MAP1LC3BQ9GZQ8 125 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 ASCL3Q9NQ33 180 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 OR2W1Q9Y3N9 320 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF705FA8MVS1 300 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 TIMM8AO60220 97 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 HRASP01112 189 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 CCKARP32238 428 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 GABRA6Q16445 453 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 ZGRF1Q86YA3 2104 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 GPR146Q96CH1 333 aa13.05□□□□□ -0.32
SHROOM1-201ENST00000319854 PSPNO60542 156 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 KBTBD11O94819 623 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 UCP1P25874 307 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 KIR2DL2P43627 348 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 SCGB1C1Q8TD33 95 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 PARLQ9H300 379 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 GP6Q9HCN6 339 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 PLSCR2Q9NRY7 297 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 IGHV3-43A0A0B4J1X8 118 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A10PA6NDY2 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A18PA6NE21 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A16PA6NEW6 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A20PA6NIJ5 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A8PA6NJQ4 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A7PA6NKC0 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A22PA8MWA6 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A12PA8MX19 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A5PA8MXJ8 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 DEFB108AA8MXU0 73 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A23PA8MXZ1 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A15PP0C7V4 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A13PP0C7W8 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A14PP0C7W9 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM90A24PP0C7X0 464 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 IGHV3-43DP0DP04 118 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 CNN1P51911 297 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 LINC00205P59089 165 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 RPS16P62249 146 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 RPRMLQ8N4K4 120 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF525Q8N782 197 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 OR2T10Q8NGZ9 312 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 TAAR6Q96RI8 345 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 GCH1P30793 250 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 TFPI2P48307 235 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 BATFQ16520 125 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 CST9LP1Q5W188 147 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 Q6P435 159 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 RPP25LQ8N5L8 163 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 IL22RA2Q969J5 263 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 ABHD14BQ96IU4 210 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 LPAR2Q9HBW0 351 aa13.04□□□□□ -0.32
SHROOM1-201ENST00000319854 F2RP25116 425 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 LHX4Q969G2 390 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 RIMS4Q9H426 269 aaPredicted RBP13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms