RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 CD300LBA8K4G0 201 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 SMPD2O60906 423 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 ZNF737O75373 536 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 IGKV1-5P01602 117 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 CECR9P0C854 216 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 PRDX4Q13162 271 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 MRPL49Q13405 166 aaKnown RBP13.32□□□□□ -0.28
USH1C-202ENST00000318024 TMEM241Q24JQ0 296 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 C22orf34Q6ZV56 151 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 RPP25LQ8N5L8 163 aaKnown RBP13.32□□□□□ -0.28
USH1C-202ENST00000318024 PINX1Q96BK5 328 aaKnown RBP13.32□□□□□ -0.28
USH1C-202ENST00000318024 LURAP1Q96LR2 239 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 TMEM68Q96MH6 324 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 LAMP3Q9UQV4 416 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 KALRNO60229 2985 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 NBASA2RRP1 2371 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 XKRY2A2RUG3 117 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 A8MXE2 369 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 EREGO14944 169 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 PLA2G5P39877 138 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 RAB4BP61018 213 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 PPP1CBP62140 327 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 MEF2BQ02080 365 aaPredicted RBP13.32□□□□□ -0.28
USH1C-202ENST00000318024 ADIRFQ15847 76 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 BSXQ3C1V8 233 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 ACTL10Q5JWF8 245 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 PSENENQ9NZ42 101 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 CACNG5Q9UF02 275 aa13.32□□□□□ -0.28
USH1C-202ENST00000318024 TMEM250H0YL14 139 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 TYMSP04818 313 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 IAPPP10997 89 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 ZNF83P51522 516 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 GPM6AP51674 278 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 ELOVL1Q9BW60 279 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 FZR1Q9UM11 496 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 SLC25A15Q9Y619 301 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 PIGBOS1A0A0B4J2F0 54 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 TRGV8A0A0C4DH27 118 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 IGHV1-18A0A0C4DH31 117 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 GGCTO75223 188 aaKnown RBP13.31□□□□□ -0.28
USH1C-202ENST00000318024 IFNA1P01562 189 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 GALR1P47211 349 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 FAM3BP58499 235 aaPredicted RBP13.31□□□□□ -0.28
USH1C-202ENST00000318024 ALKBH6Q3KRA9 238 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 ZNF66Q6ZN08 573 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 OR51H1Q8NH63 302 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 SLC25A40Q8TBP6 338 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
USH1C-202ENST00000318024 PRORYQ9H606 182 aa13.31□□□□□ -0.28
USH1C-202ENST00000318024 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
USH1C-202ENST00000318024 TCAPO15273 167 aa13.3□□□□□ -0.28
USH1C-202ENST00000318024 CA6P23280 308 aa13.3□□□□□ -0.28
USH1C-202ENST00000318024 RBPJQ06330 500 aa13.3□□□□□ -0.28
USH1C-202ENST00000318024 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
USH1C-202ENST00000318024 PCGF1Q9BSM1 259 aa13.3□□□□□ -0.28
USH1C-202ENST00000318024 RIMS4Q9H426 269 aaPredicted RBP13.3□□□□□ -0.28
USH1C-202ENST00000318024 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
USH1C-202ENST00000318024 NPIPB11E5RHQ5 1161 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 HRASP01112 189 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 SERPINE2P07093 398 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 NECAP1Q8NC96 275 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 PLK3Q9H4B4 646 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 IGHV3-64DA0A0J9YX35 117 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 H7BYZ3 331 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 M0R1B8 84 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 HSPB6O14558 160 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 MPV17P39210 176 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 HBG1P69891 147 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 HBG2P69892 147 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 PRSS8Q16651 343 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 CEACAM21Q3KPI0 293 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 TMEM14EPQ6UXP3 125 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 ZDHHC23Q8IYP9 409 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 LHX4Q969G2 390 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 PARLQ9H300 379 aa13.29□□□□□ -0.28
USH1C-202ENST00000318024 ERRFI1Q9UJM3 462 aaPredicted RBP13.29□□□□□ -0.28
USH1C-202ENST00000318024 TRAV24A0A0B4J272 114 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 ANKRD30BLA7E2S9 258 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 PPP5D1E7EU14 171 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 OR4A8P0C604 315 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 ACSM6Q6P461 480 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 OR6C3Q9NZP0 311 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 CBY1Q9Y3M2 126 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 COL6A6A6NMZ7 2263 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 IGHV2OR16-5A0A0B4J2B6 119 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 IGLV1-44P01699 117 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 FABP6P51161 128 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 ELLP55199 621 aaPredicted RBP13.28□□□□□ -0.28
USH1C-202ENST00000318024 GNB2P62879 340 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 PSG7Q13046 419 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 OR10V1Q8NGI7 309 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 KLF14Q8TD94 323 aaPredicted RBP13.28□□□□□ -0.28
USH1C-202ENST00000318024 SNHG12Q9BXW3 62 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 SLC39A9Q9NUM3 307 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
USH1C-202ENST00000318024 SYNGR1O43759 233 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms