RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 PDZD9Q8IXQ8 264 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 LSM10Q969L4 123 aaKnown RBP12.38□□□□□ -0.43
RTP1-201ENST00000312295 CYTL1Q9NRR1 136 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 ONECUT1Q9UBC0 465 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 IGSF23A1L1A6 192 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 IGHV1-8P0DP01 117 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 VAMP2P63027 116 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 MSMO1Q15800 293 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 OR10X1Q8NGY0 326 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 NRGNQ92686 78 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 R3HDM4Q96D70 268 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 NEIL1Q96FI4 390 aaPredicted RBP12.38□□□□□ -0.43
RTP1-201ENST00000312295 S1PR3Q99500 378 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 MMP24Q9Y5R2 645 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 CELSR1Q9NYQ6 3014 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 NBPF19A0A087WUL8 3843 aa12.38□□□□□ -0.43
RTP1-201ENST00000312295 PPIAL4CA0A0B4J2A2 164 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 PPIAL4GP0DN37 164 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 COX7A1P24310 79 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 GPR6P46095 362 aaPredicted RBP12.37□□□□□ -0.43
RTP1-201ENST00000312295 GNB2P62879 340 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 ID3Q02535 119 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 TMEM267Q0VDI3 215 aaPredicted RBP12.37□□□□□ -0.43
RTP1-201ENST00000312295 ZNF295-AS1Q8N0V1 137 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 C11orf42Q8N5U0 333 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 TMEM217Q8N7C4 229 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 MRPL20Q9BYC9 149 aaKnown RBP12.37□□□□□ -0.43
RTP1-201ENST00000312295 LPAR3Q9UBY5 353 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 KIAA1324LA8MWY0 1029 aaPredicted RBP12.37□□□□□ -0.43
RTP1-201ENST00000312295 CST7O76096 145 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 EWSR1Q01844 656 aaKnown RBP eCLIP12.37□□□□□ -0.43
RTP1-201ENST00000312295 CLINT1Q14677 625 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 H2BFWTQ7Z2G1 175 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 OR2C3Q8N628 320 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 DDB2Q92466 427 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 C11orf1Q9H5F2 150 aa12.37□□□□□ -0.43
RTP1-201ENST00000312295 TRBV23-1A0A0A0MS06 115 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 F12P00748 615 aaPredicted RBP12.36□□□□□ -0.43
RTP1-201ENST00000312295 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 STPG2Q8N412 459 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 MS4A7Q9GZW8 240 aaPredicted RBP12.36□□□□□ -0.43
RTP1-201ENST00000312295 SLC25A32Q9H2D1 315 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 MIOXQ9UGB7 285 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 PRELID3BQ9Y3B1 194 aa12.36□□□□□ -0.43
RTP1-201ENST00000312295 ITGB1BP1O14713 200 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 GPR137BO60478 399 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 P0C879 139 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 CT45A6P0DMU7 189 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 CT45A5P0DMU8 189 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 CT45A7P0DMV0 189 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 PVALBP20472 110 aaPredicted RBP12.35□□□□□ -0.43
RTP1-201ENST00000312295 P2RY1P47900 373 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 EFNA4P52798 201 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 ABHD12Q8N2K0 398 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 TMED6Q8WW62 240 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 CCL19Q99731 98 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 BPESC1Q9GZL8 116 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 PLEKHA2Q9HB19 425 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 WFDC1Q9HC57 220 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 SIRT7Q9NRC8 400 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 KMT2BQ9UMN6 2715 aaPredicted RBP12.35□□□□□ -0.43
RTP1-201ENST00000312295 TRAV3A0A0B4J244 114 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 J3QR06 171 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 IGHV4-39P01824 125 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 PAX9P55771 341 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 RPS16P62249 146 aaKnown RBP12.35□□□□□ -0.43
RTP1-201ENST00000312295 MIDNQ504T8 468 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 IGFBPL1Q8WX77 278 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 SSBP3Q9BWW4 388 aaPredicted RBP12.35□□□□□ -0.43
RTP1-201ENST00000312295 LYRM2Q9NU23 88 aaPredicted RBP12.35□□□□□ -0.43
RTP1-201ENST00000312295 ZFP57Q9NU63 452 aa12.35□□□□□ -0.43
RTP1-201ENST00000312295 HPRT1P00492 218 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
RTP1-201ENST00000312295 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 OR4S2Q8NH73 311 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 QTRT1Q9BXR0 403 aaKnown RBP12.34□□□□□ -0.43
RTP1-201ENST00000312295 TMEM133Q9H2Q1 129 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 SYNGR2O43760 224 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 SLC25A6P12236 298 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 THBS3P49746 956 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 ARF6P62330 175 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 TMEM252Q8N6L7 170 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.34□□□□□ -0.43
RTP1-201ENST00000312295 OR10A7Q8NGE5 316 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 RBKSQ9H477 322 aa12.34□□□□□ -0.43
RTP1-201ENST00000312295 PATZ1Q9HBE1 687 aaKnown RBP12.34□□□□□ -0.43
RTP1-201ENST00000312295 SPG11Q96JI7 2443 aa12.33□□□□□ -0.43
RTP1-201ENST00000312295 IGHV2-26A0A0B4J1V2 119 aa12.33□□□□□ -0.44
RTP1-201ENST00000312295 TNFRSF9Q07011 255 aa12.33□□□□□ -0.44
RTP1-201ENST00000312295 ZNF833PQ6ZTB9 187 aa12.33□□□□□ -0.44
RTP1-201ENST00000312295 BAP18Q8IXM2 172 aa12.33□□□□□ -0.44
RTP1-201ENST00000312295 TMEM140Q9NV12 185 aa12.33□□□□□ -0.44
RTP1-201ENST00000312295 IGHV3-72A0A0B4J1Y9 119 aa12.33□□□□□ -0.44
RTP1-201ENST00000312295 H7C2Y5 167 aa12.33□□□□□ -0.44
RTP1-201ENST00000312295 FBXO24O75426 580 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms