RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ID3Q02535 119 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 PRR30Q53SZ7 412 aaPredicted RBP18.31■□□□□ 0.52
TPM4-201ENST00000300933 MOB1BQ7L9L4 216 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 MOGAT3Q86VF5 341 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 THNSL2Q86YJ6 484 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 RBMXL1Q96E39 390 aaKnown RBP18.31■□□□□ 0.52
TPM4-201ENST00000300933 C5orf30Q96GV9 206 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 CRYABP02511 175 aaKnown RBP18.31■□□□□ 0.52
TPM4-201ENST00000300933 GZMBP10144 247 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 FAM90A2PQ658T7 463 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 SLC25A24Q6NUK1 477 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 LCN15Q6UWW0 184 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 ZNF664Q8N3J9 261 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 ZNRF1Q8ND25 227 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 GNPNAT1Q96EK6 184 aaPredicted RBP18.31■□□□□ 0.52
TPM4-201ENST00000300933 SCNM1Q9BWG6 230 aa18.31■□□□□ 0.52
TPM4-201ENST00000300933 TIMM23BQ5SRD1 257 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 ABHD14BQ96IU4 210 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 ZNF665Q9H7R5 613 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 LOC102723971A0A1B0GUV8 181 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 C1QTNF9BB2RNN3 333 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 PAX9P55771 341 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 RPL30P62888 115 aaKnown RBP18.3■□□□□ 0.52
TPM4-201ENST00000300933 TLE1Q04724 770 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 TMEM267Q0VDI3 215 aaPredicted RBP18.3■□□□□ 0.52
TPM4-201ENST00000300933 WDR25Q64LD2 544 aaPredicted RBP18.3■□□□□ 0.52
TPM4-201ENST00000300933 SP5Q6BEB4 398 aaPredicted RBP18.3■□□□□ 0.52
TPM4-201ENST00000300933 NECAP1Q8NC96 275 aa18.3■□□□□ 0.52
TPM4-201ENST00000300933 TCAPO15273 167 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 CD55P08174 381 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 PRDX2P32119 198 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 CASP6P55212 293 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 ZNF816Q0VGE8 651 aaPredicted RBP18.29■□□□□ 0.52
TPM4-201ENST00000300933 SMIM21Q3B7S5 101 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 TGIF2LYQ8IUE0 185 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 PITPNC1Q9UKF7 332 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 IGKV1D-17A0A075B6S4 117 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 A0A1B0GU03 582 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 A8MWP6 167 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 TUBG1P23258 451 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 CLEC12BQ2HXU8 276 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 OR5R1Q8NH85 324 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 ATG101Q9BSB4 218 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 C2orf88Q9BSF0 95 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 RNF115Q9Y4L5 304 aa18.29■□□□□ 0.52
TPM4-201ENST00000300933 NPIPB11E5RHQ5 1161 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 CD81P60033 236 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 DOLPP1Q86YN1 238 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 ZNF295-AS1Q8N0V1 137 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 OR4X1Q8NH49 305 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 FAM57AQ8TBR7 257 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 GAB2Q9UQC2 676 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 DSCAMO60469 2012 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 B4DEV8 164 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 CYB5R3P00387 301 aaPredicted RBP18.28■□□□□ 0.52
TPM4-201ENST00000300933 KRASP01116 189 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 HBE1P02100 147 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 AMBPP02760 352 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 SPCS3P61009 180 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 CYB5R2Q6BCY4 276 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 GCSAMQ8N6F7 178 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 ITLN1Q8WWA0 313 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 RSG1Q9BU20 258 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 VSIRQ9H7M9 311 aa18.28■□□□□ 0.52
TPM4-201ENST00000300933 FGF7P21781 194 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 TIMP3P35625 211 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 JOSD1Q15040 202 aaPredicted RBP18.27■□□□□ 0.52
TPM4-201ENST00000300933 DNLZQ5SXM8 178 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 ZCCHC24Q8N2G6 241 aaKnown RBP18.27■□□□□ 0.52
TPM4-201ENST00000300933 DEFB108BQ8NET1 73 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 A8MXE2 369 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 KLF3P57682 345 aaPredicted RBP18.27■□□□□ 0.52
TPM4-201ENST00000300933 UTF1Q5T230 341 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 SLC35E4Q6ICL7 350 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 DUX4L9Q6RFH8 374 aaPredicted RBP18.27■□□□□ 0.52
TPM4-201ENST00000300933 SPACA3Q8IXA5 215 aa18.27■□□□□ 0.52
TPM4-201ENST00000300933 COL25A1Q9BXS0 654 aaPredicted RBP18.27■□□□□ 0.52
TPM4-201ENST00000300933 MRPL37Q9BZE1 423 aaKnown RBP18.27■□□□□ 0.52
TPM4-201ENST00000300933 TPRP12270 2363 aaKnown RBP18.27■□□□□ 0.51
TPM4-201ENST00000300933 A0A0G2JNJ9 132 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 CLEC18AA5D8T8 446 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 OOEPA6NGQ2 149 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 HNF4GQ14541 408 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 TMEM183AQ8IXX5 376 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 Q8NA96 180 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 CLEC18CQ8NCF0 446 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 Q9UFV3 132 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 LRBAP50851 2863 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 KIAA1324LA8MWY0 1029 aaPredicted RBP18.26■□□□□ 0.51
TPM4-201ENST00000300933 G6PCP35575 357 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 RND2P52198 227 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 NINJ1Q92982 152 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 ATP5SQ99766 215 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 PSG11Q9UQ72 335 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 TAS2R30P59541 319 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 ZNF787Q6DD87 383 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 FGFRL1Q8N441 504 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 RCC1LQ96I51 464 aaKnown RBP18.26■□□□□ 0.51
TPM4-201ENST00000300933 RPRMQ9NS64 109 aa18.26■□□□□ 0.51
TPM4-201ENST00000300933 DCAF16Q9NXF7 216 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms