RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 IFNA4P05014 189 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 MYL12AP19105 171 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 SSBP2P81877 361 aaPredicted RBP7.75□□□□□ -1.17
USP41-201ENST00000292729 ATP5G2Q06055 141 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 EXOSC2Q13868 293 aaKnown RBP7.75□□□□□ -1.17
USP41-201ENST00000292729 DEFB135Q30KP9 77 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 CNPY1Q3B7I2 92 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 TIMM50Q3ZCQ8 353 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 C5orf24Q7Z6I8 188 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 LHFPL3Q86UP9 236 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 CLVS1Q8IUQ0 354 aaPredicted RBP7.75□□□□□ -1.17
USP41-201ENST00000292729 TMEM61Q8N0U2 210 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 KIR2DL5AQ8N109 375 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 IL1F10Q8WWZ1 152 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 EDARADDQ8WWZ3 215 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 ABHD14BQ96IU4 210 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 AGMATQ9BSE5 352 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 ZNF230Q9UIE0 474 aaPredicted RBP7.75□□□□□ -1.17
USP41-201ENST00000292729 TRAV25A0A0B4J276 109 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 E9PI62 339 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 MYL12BO14950 172 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 GGCTO75223 188 aaKnown RBP7.74□□□□□ -1.17
USP41-201ENST00000292729 PDCD6O75340 191 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 GABARAPO95166 117 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 OR9G9P0C7N8 305 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 MGMTP16455 207 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 CBLN1P23435 193 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 PSMB9P28065 219 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 RHOGP84095 191 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 TM4SF20Q53R12 229 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 GLT8D1Q68CQ7 371 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 GLIPR1L1Q6UWM5 242 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 STPG3Q8N7X2 389 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 ADAD2Q8NCV1 583 aaKnown RBP7.74□□□□□ -1.17
USP41-201ENST00000292729 KCNG3Q8TAE7 436 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 C2CD4CQ8TF44 421 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 TSC22D3Q99576 134 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 PHB2Q99623 299 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 SELENOIQ9C0D9 397 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 AKIP1Q9NQ31 210 aa7.74□□□□□ -1.17
USP41-201ENST00000292729 TRBV9A0A0B4J1U6 114 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 RBMXL2O75526 392 aaKnown RBP7.73□□□□□ -1.17
USP41-201ENST00000292729 CRYGBP07316 175 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 IGFBP3P17936 291 aaPredicted RBP7.73□□□□□ -1.17
USP41-201ENST00000292729 PJVKQ0ZLH3 352 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 MLLT11Q13015 90 aaPredicted RBP7.73□□□□□ -1.17
USP41-201ENST00000292729 RBMS2Q15434 407 aaKnown RBP7.73□□□□□ -1.17
USP41-201ENST00000292729 CCDC58Q4VC31 144 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 SIGIRRQ6IA17 410 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 RPL22L1Q6P5R6 122 aaKnown RBP7.73□□□□□ -1.17
USP41-201ENST00000292729 GPHB5Q86YW7 130 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 CDH26Q8IXH8 852 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 ZNF383Q8NA42 475 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 DRAXINQ8NBI3 349 aaPredicted RBP7.73□□□□□ -1.17
USP41-201ENST00000292729 FAM46BQ96A09 425 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 LGALS12Q96DT0 336 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 YIPF6Q96EC8 236 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 Q96M66 194 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 BANF2Q9H503 90 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 ERVK13-1Q9NX77 482 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 CKLFQ9UBR5 152 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 AASSQ9UDR5 926 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 FBXL7Q9UJT9 491 aa7.73□□□□□ -1.17
USP41-201ENST00000292729 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 A8MWP6 167 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 H3BMQ9 156 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 PROP1O75360 226 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 IGLV2-23P01705 113 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 EDN2P20800 178 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 ZBTB25P24278 435 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 WNT4P56705 351 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 SPHARQ15513 63 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 GPR107Q5VW38 600 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 AWAT2Q6E213 333 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 OR4A47Q6IF82 309 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 LINC00299Q6ZSB3 139 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 MOB1BQ7L9L4 216 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 SLC38A6Q8IZM9 456 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 GVQW1Q8N7I0 195 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 NANOGP1Q8N7R0 232 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 NECAP1Q8NC96 275 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 OR52I1Q8NGK6 324 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 OR1L6Q8NGR2 347 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 C11orf45Q8TAV5 145 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 FUNDC2Q9BWH2 189 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 C11orf54Q9H0W9 315 aaPredicted RBP7.72□□□□□ -1.17
USP41-201ENST00000292729 AMBNQ9NP70 447 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 SLC35D1Q9NTN3 355 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 ZNF221Q9UK13 617 aa7.72□□□□□ -1.17
USP41-201ENST00000292729 LSM2Q9Y333 95 aaKnown RBP7.72□□□□□ -1.17
USP41-201ENST00000292729 MPPED1O15442 326 aa7.71□□□□□ -1.18
USP41-201ENST00000292729 CRTAPO75718 401 aaPredicted RBP7.71□□□□□ -1.18
USP41-201ENST00000292729 SCAF4O95104 1147 aaKnown RBP7.71□□□□□ -1.18
USP41-201ENST00000292729 CEACAM6P40199 344 aa7.71□□□□□ -1.18
USP41-201ENST00000292729 TAS2R43P59537 309 aa7.71□□□□□ -1.18
USP41-201ENST00000292729 CBX3Q13185 183 aa7.71□□□□□ -1.18
USP41-201ENST00000292729 FAM106AQ4KMX7 169 aa7.71□□□□□ -1.18
USP41-201ENST00000292729 ZNF880Q6PDB4 577 aa7.71□□□□□ -1.18
USP41-201ENST00000292729 TMPRSS11AQ6ZMR5 421 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms