RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 TMEM252Q8N6L7 170 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 TSPOP30536 169 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 TMPRSS3P57727 454 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 RPS20P60866 119 aaKnown RBP12.29□□□□□ -0.44
CUX2-201ENST00000261726 TMEM170BQ5T4T1 132 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 SLC25A34Q6PIV7 304 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 C17orf51A8MQB3 221 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 BIVMQ86UB2 503 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 FGF11Q92914 225 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 DUSP15Q9H1R2 295 aaPredicted RBP12.29□□□□□ -0.44
CUX2-201ENST00000261726 DNAJC4Q9NNZ3 241 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 TRBV20OR9-2A0A075B6H5 130 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 IGHV1-45A0A0A0MS14 117 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 IL4P05112 153 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 CXCL2P19875 107 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 PMCHL1Q16048 86 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 WNT2BQ93097 391 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 LOC105371242A0A075B767 164 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 PGLYRP1O75594 196 aaPredicted RBP12.28□□□□□ -0.44
CUX2-201ENST00000261726 FOLR2P14207 255 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 ISXQ2M1V0 245 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 C19orf48Q6RUI8 117 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 HTN3P15516 51 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 OR10AG1Q8NH19 301 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 IGHV3-49A0A0A0MS15 119 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 MEF2BQ02080 365 aaPredicted RBP12.28□□□□□ -0.44
CUX2-201ENST00000261726 STPG1Q5TH74 334 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 BEND2Q8NDZ0 799 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 ZCCHC14Q8WYQ9 949 aaKnown RBP12.28□□□□□ -0.44
CUX2-201ENST00000261726 TAF15Q92804 592 aaKnown RBP eCLIP12.28□□□□□ -0.44
CUX2-201ENST00000261726 EEF1AKMT3Q96AZ1 226 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 B4E171 279 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 GOLT1AQ6ZVE7 132 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 ZG16O60844 167 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 HKR1P10072 659 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 NPPCP23582 126 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 TMEM183AQ8IXX5 376 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 FGFRL1Q8N441 504 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 NRIP2Q9BQI9 281 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 TMEM222Q9H0R3 208 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 TGFAP01135 160 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 FAM27BQ5VT28 67 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 GPR146Q96CH1 333 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
CUX2-201ENST00000261726 LINC00862A6NCI5 91 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 HLA-DRB1P01911 266 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 TRGC1P0CF51 173 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 TCF24Q7RTU0 167 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 FOXS1O43638 330 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 CEACAM4O75871 244 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 S4R3C0 116 aa12.27□□□□□ -0.44
CUX2-201ENST00000261726 SCN4AP35499 1836 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 PCM1Q15154 2024 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 GRIFINA4D1Z8 144 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 ZNF79Q15937 498 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 C10orf128Q5T292 105 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 TRAV30A0A087WSZ9 112 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 A0A0U1RQV5 110 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 FTH1P19P0C7X4 201 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 C18orf15Q96N68 181 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 TRAV8-6A0A0B4J262 113 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 H0YL77 283 aa12.27□□□□□ -0.45
CUX2-201ENST00000261726 SELENOHQ8IZQ5 122 aaKnown RBP12.27□□□□□ -0.45
CUX2-201ENST00000261726 QTRT1Q9BXR0 403 aaKnown RBP12.27□□□□□ -0.45
CUX2-201ENST00000261726 PRR33A8MZF0 331 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 MOSP00540 346 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 PNKDQ8N490 385 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 ITLN2Q8WWU7 325 aaPredicted RBP12.26□□□□□ -0.45
CUX2-201ENST00000261726 ALKBH7Q9BT30 221 aaPredicted RBP12.26□□□□□ -0.45
CUX2-201ENST00000261726 SSBP3Q9BWW4 388 aaPredicted RBP12.26□□□□□ -0.45
CUX2-201ENST00000261726 SH3BGRL3Q9H299 93 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 TEX29Q8N6K0 151 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 TOMM7Q9P0U1 55 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 SIRT4Q9Y6E7 314 aaPredicted RBP12.26□□□□□ -0.45
CUX2-201ENST00000261726 C1orf174Q8IYL3 243 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 C10orf111Q8N326 155 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 RBM38Q9H0Z9 239 aaKnown RBP12.26□□□□□ -0.45
CUX2-201ENST00000261726 C8orf88P0DMB2 117 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 TNFSF10P50591 281 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 P2RY6Q15077 328 aa12.26□□□□□ -0.45
CUX2-201ENST00000261726 MRPL16Q9NX20 251 aaKnown RBP12.26□□□□□ -0.45
CUX2-201ENST00000261726 KIF13BQ9NQT8 1826 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 SPAG17Q6Q759 2223 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 ODAMA1E959 279 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 CXorf65A6NEN9 183 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 MOSPD3O75425 235 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 OR51G1Q8NGK1 321 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 TNFRSF18Q9Y5U5 241 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 CTSSP25774 331 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
CUX2-201ENST00000261726 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms