RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TMEM249Q2WGJ8 235 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 H2BFWTQ7Z2G1 175 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 ZCCHC14Q8WYQ9 949 aaKnown RBP12.97□□□□□ -0.33
DDX55-201ENST00000238146 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
DDX55-201ENST00000238146 WDR83OSQ9Y284 106 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 GTF3C1Q12789 2109 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 CELSR3Q9NYQ7 3312 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 C15orf62A8K5M9 175 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 LINC00205P59089 165 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 YPEL3P61236 119 aaPredicted RBP12.97□□□□□ -0.33
DDX55-201ENST00000238146 OR2M7Q8NG81 312 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 RAB1CQ92928 201 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 SDSLQ96GA7 329 aa12.97□□□□□ -0.33
DDX55-201ENST00000238146 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 HPRT1P00492 218 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 ZNF25P17030 456 aaPredicted RBP12.96□□□□□ -0.33
DDX55-201ENST00000238146 EDDM3BP56851 147 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 HES7Q9BYE0 225 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 PILRBQ9UKJ0 227 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 TP53TG3Q9ULZ0 132 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 DNAJC13O75165 2243 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 F6UZH7 168 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 YPEL1O60688 119 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 NEURL1O76050 574 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 CD1BP29016 333 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 ZXDAP98168 799 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 TRIP6Q15654 476 aaKnown RBP12.96□□□□□ -0.33
DDX55-201ENST00000238146 CYB5R2Q6BCY4 276 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 VASH2Q86V25 355 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 CMTM2Q8TAZ6 248 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 YPEL2Q96QA6 119 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 TMEM106BQ9NUM4 274 aa12.96□□□□□ -0.33
DDX55-201ENST00000238146 PCSK5Q92824 1860 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 MDFIC2A0A1B0GVS7 189 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 A0A1W2PPV4 95 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 TMEM30CPA0ZSE6 113 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 FAM166BA8MTA8 275 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 HAND1O96004 215 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 SELEP16581 610 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 UBE2NP61088 152 aaKnown RBP12.96□□□□□ -0.34
DDX55-201ENST00000238146 MDP1Q86V88 176 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 R3HDM4Q96D70 268 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 FAM173AQ9BQD7 235 aa12.96□□□□□ -0.34
DDX55-201ENST00000238146 PATZ1Q9HBE1 687 aaKnown RBP12.96□□□□□ -0.34
DDX55-201ENST00000238146 LINC00473A8K010 186 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 HBZP02008 142 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 MAGEA5P43359 124 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 TDRG1Q3Y452 100 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 DCAF10Q5QP82 559 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 ZNF705AQ6ZN79 300 aaPredicted RBP12.95□□□□□ -0.34
DDX55-201ENST00000238146 Q6ZWC4 215 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 ZDHHC11Q9H8X9 412 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 CFIP05156 583 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 KITLGP21583 273 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 LINC00310P59036 64 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 C3AR1Q16581 482 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 ALKBH6Q3KRA9 238 aa12.95□□□□□ -0.34
DDX55-201ENST00000238146 SELENOTP62341 195 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 AESQ08117 197 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 TMPRSS7Q7RTY8 843 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 MCEMP1Q8IX19 187 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 OCC1Q8TAD7 63 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 TMEM204Q9BSN7 226 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 QTRT1Q9BXR0 403 aaKnown RBP12.94□□□□□ -0.34
DDX55-201ENST00000238146 OR2J1Q9GZK6 312 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 C12orf49Q9H741 205 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 MARCH11A6NNE9 402 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 WISP2O76076 250 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 GRPP07492 148 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 ARL14EPLP0DKL9 152 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 TIMP3P35625 211 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 SSPNQ14714 243 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 ZNF766Q5HY98 468 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 TOMM20LQ6UXN7 152 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 B4GALT7Q9UBV7 327 aa12.94□□□□□ -0.34
DDX55-201ENST00000238146 SCO2A0A1W2PP80 73 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 OOEPA6NGQ2 149 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 HNF1AP20823 631 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 CBLN1P23435 193 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 HOXA4Q00056 320 aaPredicted RBP12.93□□□□□ -0.34
DDX55-201ENST00000238146 TPTE2P1Q5T6R2 138 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 TIPARPQ7Z3E1 657 aaKnown RBP12.93□□□□□ -0.34
DDX55-201ENST00000238146 OR10G8Q8NGN5 311 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 CT55Q8WUE5 264 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 BCL2L2Q92843 193 aaPredicted RBP12.93□□□□□ -0.34
DDX55-201ENST00000238146 NINJ1Q92982 152 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 TAAR6Q96RI8 345 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 DMDP11532 3685 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 M0QZK8 103 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 PMS2CLQ68D20 193 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 LRP11Q86VZ4 500 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 TCTEX1D1Q8N7M0 179 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 MRGPRDQ8TDS7 321 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 C20orf144Q9BQM9 153 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 IL17BQ9UHF5 180 aa12.93□□□□□ -0.34
DDX55-201ENST00000238146 TNFSF13O75888 250 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 CELA3BP08861 270 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 OR9G9P0C7N8 305 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 STAG3L2P0CL84 134 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 STAG3L3P0CL85 134 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms