RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 MISP3Q96FF7 219 aa7.15□□□□□ -1.27
HNRNPU-222ENST00000639880 POM121Q96HA1 1249 aa7.15□□□□□ -1.27
HNRNPU-222ENST00000639880 RCC1LQ96I51 464 aaKnown RBP7.15□□□□□ -1.27
HNRNPU-222ENST00000639880 PITPNC1Q9UKF7 332 aa7.15□□□□□ -1.27
HNRNPU-222ENST00000639880 SLC45A2Q9UMX9 530 aa7.15□□□□□ -1.27
HNRNPU-222ENST00000639880 DBX1A6NMT0 343 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 FAM157CP0CG43 387 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 ORM2P19652 201 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 G0S2P27469 103 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 LGALS4P56470 323 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 LRRC10Q5BKY1 277 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 TMEM108Q6UXF1 575 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 OR2V2Q96R30 315 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 CRYABP02511 175 aaKnown RBP7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 CELA3BP08861 270 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 HOXA6P31267 233 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 MPV17P39210 176 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 TPPP2P59282 170 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 SLC35B1P78383 322 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 OR8G5Q8NG78 346 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 ANAPC16Q96DE5 110 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 C18orf12Q96KH6 178 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 TMEM56Q96MV1 263 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 PLSCR2Q9NRY7 297 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 KIF26AQ9ULI4 1882 aaPredicted RBP7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 COL4A4P53420 1690 aaPredicted RBP7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 PQLC2LA1A4F0 135 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 CRISP2P16562 243 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 ARL3P36405 182 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 CAMPP49913 170 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 UBE2L3P68036 154 aaKnown RBP7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 TEPPQ6URK8 271 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 ZDHHC16Q969W1 377 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 MEGF10Q96KG7 1140 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 LINC00470Q9BZP3 86 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 PARD6AQ9NPB6 346 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 AUP1Q9Y679 476 aa7.14□□□□□ -1.27
HNRNPU-222ENST00000639880 COL4A3Q01955 1670 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 LRRC3CA6NJW4 275 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 J3QR06 171 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 ATXN7O15265 892 aaPredicted RBP7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 SRP19P09132 144 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 TRGC1P0CF51 173 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 CHRNB4P30926 498 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 FAM209BQ5JX69 171 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 MIC13Q5XKP0 118 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 GGNQ86UU5 652 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 ABHD12Q8N2K0 398 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 RNF7Q9UBF6 113 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 ALPK3Q96L96 1907 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 C12orf77C9JDV5 145 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 CHEK1O14757 476 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 ADCYAP1P18509 176 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 ABLIM2Q6H8Q1 611 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 TMEM105Q8N8V8 129 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 TMEM45BQ96B21 275 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 CCL13Q99616 98 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 DCTN5Q9BTE1 182 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 PXMP4Q9Y6I8 212 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 INTS1Q8N201 2190 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 ODAMA1E959 279 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 MGST3O14880 152 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 HPRT1P00492 218 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 TFF1P04155 84 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 MRPL54Q6P161 138 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 ZNRF1Q8ND25 227 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 LSM10Q969L4 123 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 WFIKKN1Q96NZ8 548 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 PARLQ9H300 379 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 TMEM56-RWDD3S4R434 201 aa7.13□□□□□ -1.27
HNRNPU-222ENST00000639880 C20orf202A1L168 122 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 PDE6DO43924 150 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 PAX6P26367 422 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 IER3P46695 156 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 AMTP48728 403 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 LHX2P50458 406 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 SUMO1P63165 101 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 HGFACQ04756 655 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 ZFP36L1Q07352 338 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 PSG7Q13046 419 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 HIST3H3Q16695 136 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 VMA21Q3ZAQ7 101 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 FAM216AQ8WUB2 273 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 ITLN1Q8WWA0 313 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 HARBI1Q96MB7 349 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 VAMP8Q9BV40 100 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 WDR61Q9GZS3 305 aaKnown RBP7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 GAL3ST2Q9H3Q3 398 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 CREBBPQ92793 2442 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 COX7A1P24310 79 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 CLDN18P56856 261 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 SPNS3Q6ZMD2 512 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 PLPPR1Q8TBJ4 325 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 C1orf147Q96MC9 270 aaPredicted RBP7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 NPVFQ9HCQ7 196 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 NCOA6Q14686 2063 aaPredicted RBP7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 ZFHX2Q9C0A1 2572 aaPredicted RBP7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 TRAV34A0A0B4J273 112 aa7.12□□□□□ -1.27
HNRNPU-222ENST00000639880 HELTA6NFD8 242 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms