RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TMEM167BQ9NRX6 74 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 PPIAL4AQ9Y536 164 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 LOC102723996A0A087X1L8 192 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 H0YIZ8 118 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 DANCRP0C864 163 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-216ENST00000639300 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
SCARB2-216ENST00000639300 SSX7Q7RTT5 188 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 ZNRF1Q8ND25 227 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 MARVELD3Q96A59 401 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 PCNX2A6NKB5 2137 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 CRISP2P16562 243 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 WNT5AP41221 380 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 RPL29P47914 159 aaKnown RBP12.3□□□□□ -0.44
SCARB2-216ENST00000639300 RNF144BQ7Z419 303 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 SLC24A4Q8NFF2 622 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 OR1L8Q8NGR8 309 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 NDUFB4O95168 129 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 LINC00470Q9BZP3 86 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 RPRMQ9NS64 109 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 LOC102723971A0A1B0GUV8 181 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 TRGC2P03986 189 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-216ENST00000639300 IQCJQ1A5X6 159 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 VWA1Q6PCB0 445 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 OR4F17Q8NGA8 305 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 SGMS2Q8NHU3 365 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 RAB24Q969Q5 203 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 MARS2Q96GW9 593 aaKnown RBP12.3□□□□□ -0.44
SCARB2-216ENST00000639300 RNF126Q9BV68 326 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 AAMDCQ9H7C9 122 aa12.3□□□□□ -0.44
SCARB2-216ENST00000639300 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 C5orf63A6NC05 138 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 ZNF253O75346 499 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 CLPSP04118 112 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 TNFRSF9Q07011 255 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
SCARB2-216ENST00000639300 ZNF645Q8N7E2 425 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 FAM216AQ8WUB2 273 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 GALNT14Q96FL9 552 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 OR51B2Q9Y5P1 312 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 PXMP4Q9Y6I8 212 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 HELTA6NFD8 242 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 MARCH11A6NNE9 402 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 C1orf185Q5T7R7 199 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 MIC13Q5XKP0 118 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 SMDT1Q9H4I9 107 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 MMP7P09237 267 aaPredicted RBP12.29□□□□□ -0.44
SCARB2-216ENST00000639300 SLC35B1P78383 322 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
SCARB2-216ENST00000639300 RAB1BQ9H0U4 201 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 PARD6AQ9NPB6 346 aa12.29□□□□□ -0.44
SCARB2-216ENST00000639300 TRAV34A0A0B4J273 112 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 C9orf172C9J069 976 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 K7N7A8 449 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 PDPNQ86YL7 162 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 PACRGQ96M98 296 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-216ENST00000639300 VAMP8Q9BV40 100 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 ANAPC1Q9H1A4 1944 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 A8MXK9 166 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 CELA3BP08861 270 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 OR10J1P30954 320 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 RTP5Q14D33 572 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 Q6ZT83 130 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 CALYQ9NYX4 217 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 GBF1Q92538 1859 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-216ENST00000639300 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 ZIC4Q8N9L1 334 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 WBP1Q96G27 269 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 C1QTNF5Q9BXJ0 243 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 KCNMB2Q9Y691 235 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 SPCS3P61009 180 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 PSG7Q13046 419 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 FAM201AQ5SY85 155 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 WDR25Q64LD2 544 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-216ENST00000639300 DCTN5Q9BTE1 182 aa12.28□□□□□ -0.44
SCARB2-216ENST00000639300 IGLV3-32A0A0A0MS00 114 aa12.27□□□□□ -0.44
SCARB2-216ENST00000639300 SRSF10O75494 262 aaKnown RBP12.27□□□□□ -0.44
SCARB2-216ENST00000639300 PLAUP00749 431 aa12.27□□□□□ -0.44
SCARB2-216ENST00000639300 IER3P46695 156 aa12.27□□□□□ -0.44
SCARB2-216ENST00000639300 FAM3BP58499 235 aaPredicted RBP12.27□□□□□ -0.44
SCARB2-216ENST00000639300 RANP62826 216 aaKnown RBP12.27□□□□□ -0.44
SCARB2-216ENST00000639300 ZFP36L1Q07352 338 aaKnown RBP12.27□□□□□ -0.44
SCARB2-216ENST00000639300 RPEL1Q2QD12 228 aa12.27□□□□□ -0.44
SCARB2-216ENST00000639300 FAM131CQ96AQ9 280 aa12.27□□□□□ -0.44
SCARB2-216ENST00000639300 TMEM45BQ96B21 275 aa12.27□□□□□ -0.44
SCARB2-216ENST00000639300 CLDN16Q9Y5I7 305 aa12.27□□□□□ -0.44
SCARB2-216ENST00000639300 PINLYPA6NC86 204 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 CDK2AP1O14519 115 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 CXorf1O96002 111 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
SCARB2-216ENST00000639300 EGR1P18146 543 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 FHL1Q13642 323 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 TMEM105Q8N8V8 129 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms