RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TMEM14EPQ6UXP3 125 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 LYG1Q8N1E2 194 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 MSL2Q9HCI7 577 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 FAM96BQ9Y3D0 163 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 H3BP45 60 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 USF1P22415 310 aaPredicted RBP3.83□□□□□ -1.8
SCN1A-210ENST00000635776 PPP1CCP36873 323 aaKnown RBP3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF674Q2M3X9 581 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF525Q8N782 197 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 TRIOBPQ9H2D6 2365 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF737O75373 536 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CXorf1O96002 111 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CD55P08174 381 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 TLE1Q04724 770 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 GUSBP1Q15486 140 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 OR10X1Q8NGY0 326 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ITLN1Q8WWA0 313 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 UBE2L5PA0A1B0GUS4 154 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 SCO1O75880 301 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 OR1L8Q8NGR8 309 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RFESDQ8TAC1 157 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CHD3Q12873 2000 aaKnown RBP3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RTTNQ86VV8 2226 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 LOC102723971A0A1B0GUV8 181 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ATP6V1G2-DDX39BF2Z307 99 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 KBTBD11O94819 623 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CYB5R3P00387 301 aaPredicted RBP3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CT45A6P0DMU7 189 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CT45A5P0DMU8 189 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CT45A7P0DMV0 189 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 NPY1RP25929 384 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 HAGHQ16775 308 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CT45A1Q5HYN5 189 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 FFAR4Q5NUL3 377 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RTN4RL2Q86UN3 420 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 PDPNQ86YL7 162 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 OR52L2PQ8NGH6 319 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CT45A3Q8NHU0 189 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RBKSQ9H477 322 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 TECRQ9NZ01 308 aaKnown RBP3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RAB5AP20339 215 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 ELLP55199 621 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 MEF2BQ02080 365 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 FOXC1Q12948 553 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 BSXQ3C1V8 233 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 RNFT1Q5M7Z0 435 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 OR9G1Q8NH87 305 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 FLYWCH2Q96CP2 140 aaKnown RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 RHOVQ96L33 236 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 SLC25A10Q9UBX3 287 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 ARL2-SNX15V9GYD0 113 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 C17orf100A8MU93 164 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 FBP1P09467 338 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM267Q0VDI3 215 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TIGITQ495A1 244 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 PQLC2Q6ZP29 291 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 DOLPP1Q86YN1 238 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 SLC24A4Q8NFF2 622 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF596Q8TC21 504 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 H3BQ15 152 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 APOBEC3AP31941 199 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 G6PCP35575 357 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 HERPUD1Q15011 391 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 FAM162BQ5T6X4 162 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 CACNG8Q8WXS5 425 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 MYO7BQ6PIF6 2116 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 APC2O95996 2303 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 SIGLEC5O15389 551 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 GLIPR1P48060 266 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 RPL31P62899 125 aaKnown RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 KLRB1Q12918 225 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 H1FXQ92522 213 aaKnown RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 OR4C12Q96R67 309 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TMPRSS5Q9H3S3 457 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 PARD6AQ9NPB6 346 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TNFSF13O75888 250 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 SMIM6P0DI80 62 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 CD99P14209 185 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 OPRK1P41145 380 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 KIAA0141Q14154 515 aaPredicted RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 C8orf31Q8N9H6 132 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 ADAMTS9Q9P2N4 1935 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 MORN2Q502X0 79 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 ADAM5Q6NVV9 412 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 OR13A1Q8NGR1 328 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 RNF5Q99942 180 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 WDR83OSQ9Y284 106 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TRAV9-1A0A075B6T8 112 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 DUTP33316 252 aaKnown RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 ADIRFQ15847 76 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 LTC4SQ16873 150 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM249Q2WGJ8 235 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 CRIP3Q6Q6R5 217 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 CYP2G1PQ6ZSU1 146 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF826PQ6ZT77 177 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 MMD2Q8IY49 270 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 OR4F5Q8NH21 305 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 OR4F4Q96R69 305 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 MRPL32Q9BYC8 188 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms