RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 MYOZ3Q8TDC0 251 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 SNRNP40Q96DI7 357 aaKnown RBP7.16□□□□□ -1.26
ALMS1-208ENST00000620466 SPSB2Q99619 263 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 CISD1Q9NZ45 108 aaKnown RBP7.16□□□□□ -1.26
ALMS1-208ENST00000620466 WIPI2Q9Y4P8 454 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 GFRA1P56159 465 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 SLC35B1P78383 322 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 SERF2P84101 59 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 MMDQ15546 238 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 CCDC144NLQ6NUI1 221 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 MEGF10Q96KG7 1140 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 TUBD1Q9UJT1 453 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 CHCHD2Q9Y6H1 151 aaPredicted RBP7.16□□□□□ -1.26
ALMS1-208ENST00000620466 TRAV34A0A0B4J273 112 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 LOC390937A0A1W2PQ73 354 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 OR4C46A6NHA9 309 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 RPL29P47914 159 aaKnown RBP7.16□□□□□ -1.26
ALMS1-208ENST00000620466 UCP3P55916 312 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 IGHV3OR16-12A0A075B7B8 117 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 LOC389332A0A1B0GUA5 103 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 HAX1O00165 279 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 EBLN2Q6P2I7 272 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 FADS6Q8N9I5 356 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 RNF126Q9BV68 326 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 PRDM14Q9GZV8 571 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 COLQQ9Y215 455 aaPredicted RBP7.16□□□□□ -1.26
ALMS1-208ENST00000620466 B4E171 279 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 CIDEAO60543 219 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 TSPAN7P41732 249 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 COL4A6Q14031 1691 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 TGIF1Q15583 401 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 SAXO1Q8IYX7 474 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 DLL3Q9NYJ7 618 aa7.16□□□□□ -1.26
ALMS1-208ENST00000620466 HBZP02008 142 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 APCSP02743 223 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 SCGB1D4Q6XE38 83 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 BIVMQ86UB2 503 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 TPRX1Q8N7U7 411 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 COL8A1P27658 744 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 LRP11Q86VZ4 500 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 TCTEX1D1Q8N7M0 179 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 SYT8Q8NBV8 401 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 OR8A1Q8NGG7 326 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 SYNGR3O43761 229 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 FAM106CPP0CH98 169 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 NUBP1P53384 320 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 STARD6P59095 220 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 HLA-DRB5Q30154 266 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 TMEM251Q8N6I4 163 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 DNASE2BQ8WZ79 361 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 SRD5A3Q9H8P0 318 aa7.15□□□□□ -1.26
ALMS1-208ENST00000620466 A0A0A6YYD4 124 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 SMAD7O15105 426 aaKnown RBP7.15□□□□□ -1.27
ALMS1-208ENST00000620466 CLPSP04118 112 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 GZMHP20718 246 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 OR8I2Q8N0Y5 310 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 TMEM140Q9NV12 185 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 FNDC1Q4ZHG4 1894 aaPredicted RBP7.15□□□□□ -1.27
ALMS1-208ENST00000620466 SS18L1O75177 396 aaPredicted RBP7.15□□□□□ -1.27
ALMS1-208ENST00000620466 IGLV3-19P01714 112 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 MST1P26927 711 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 SUCLG1P53597 346 aaKnown RBP7.15□□□□□ -1.27
ALMS1-208ENST00000620466 SMAGPQ0VAQ4 97 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 KRTCAP3Q53RY4 240 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 OR10J6PQ8NGY7 276 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 SMIM8Q96KF7 97 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 LYZL4Q96KX0 146 aa7.15□□□□□ -1.27
ALMS1-208ENST00000620466 METTL1Q9UBP6 276 aaKnown RBP7.15□□□□□ -1.27
ALMS1-208ENST00000620466 SCN2AQ99250 2005 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 TMSB15BA0A087X1C1 80 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 PQLC2LA1A4F0 135 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 PRDX2P32119 198 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
ALMS1-208ENST00000620466 ZNF137PP52743 207 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 UCP2P55851 309 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 B2MP61769 119 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 PAQR4Q8N4S7 273 aaPredicted RBP7.14□□□□□ -1.27
ALMS1-208ENST00000620466 FGF11Q92914 225 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 METTL26Q96S19 204 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 CCL13Q99616 98 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 IL36RNQ9UBH0 155 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 HSPB8Q9UJY1 196 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 PILRBQ9UKJ0 227 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 K7N7A8 449 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 OR10J1P30954 320 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 FAM3BP58499 235 aaPredicted RBP7.14□□□□□ -1.27
ALMS1-208ENST00000620466 CD81P60033 236 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 SPANXN1Q5VSR9 72 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 ZNF738Q8NE65 137 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 TAF15Q92804 592 aaKnown RBP eCLIP7.14□□□□□ -1.27
ALMS1-208ENST00000620466 LOC102724200A0A096LPH7 203 aaPredicted RBP7.14□□□□□ -1.27
ALMS1-208ENST00000620466 SLC25A53Q5H9E4 307 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 FAM209BQ5JX69 171 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 CYB5R2Q6BCY4 276 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 OR1L8Q8NGR8 309 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 MARS2Q96GW9 593 aaKnown RBP7.14□□□□□ -1.27
ALMS1-208ENST00000620466 HELTA6NFD8 242 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 M0R143 59 aa7.14□□□□□ -1.27
ALMS1-208ENST00000620466 HPRT1P00492 218 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms