RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TRAV38-1A0A0B4J264 116 aa11.97□□□□□ -0.49
CHD1-212ENST00000614616 ZNF708P17019 499 aa11.97□□□□□ -0.49
CHD1-212ENST00000614616 PPP1CAP62136 330 aa11.97□□□□□ -0.49
CHD1-212ENST00000614616 ABHD14AQ9BUJ0 271 aa11.97□□□□□ -0.49
CHD1-212ENST00000614616 MGAT2Q10469 447 aa11.97□□□□□ -0.49
CHD1-212ENST00000614616 FXYD3Q14802 87 aa11.97□□□□□ -0.49
CHD1-212ENST00000614616 CENPWQ5EE01 88 aa11.97□□□□□ -0.49
CHD1-212ENST00000614616 AMBPP02760 352 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 TMEM178AQ8NBL3 297 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 OR4C3Q8NH37 302 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 SDF2L1Q9HCN8 221 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 ADMP35318 185 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 ZNF645Q8N7E2 425 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 GNB1LQ9BYB4 327 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 GTSF1LQ9H1H1 148 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 COX11Q9Y6N1 276 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 NUP210Q8TEM1 1887 aaPredicted RBP11.96□□□□□ -0.49
CHD1-212ENST00000614616 A0A0U1RQV5 110 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 A0A1B0GWJ7 208 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 MKRN2OSH3BPM6 223 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 LINC01387J3KSC0 135 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 ZNF324O75467 553 aaPredicted RBP11.96□□□□□ -0.49
CHD1-212ENST00000614616 WISP3O95389 354 aaPredicted RBP11.96□□□□□ -0.49
CHD1-212ENST00000614616 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 OR13C6PQ8NH95 151 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 ST6GALNAC6Q969X2 333 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 GPR146Q96CH1 333 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 GRAMD2BQ96HH9 432 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 TMEM208Q9BTX3 173 aa11.96□□□□□ -0.49
CHD1-212ENST00000614616 CD5P06127 495 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 WNT5AP41221 380 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 TMEM189A5PLL7 270 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 CEACAM16Q2WEN9 425 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 SPATA46Q5T0L3 261 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 RTN4RQ9BZR6 473 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 RAC3P60763 192 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 RPS20P60866 119 aaKnown RBP11.96□□□□□ -0.5
CHD1-212ENST00000614616 C1QL3Q5VWW1 255 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 MOB3BQ86TA1 216 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 RPS19BP1Q86WX3 136 aaKnown RBP11.96□□□□□ -0.5
CHD1-212ENST00000614616 NUP37Q8NFH4 326 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 FOXB1Q99853 325 aa11.96□□□□□ -0.5
CHD1-212ENST00000614616 LDLRAD4O15165 306 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 TSPAN2O60636 221 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 CCL5P13501 91 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 SLC23A3Q6PIS1 610 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
CHD1-212ENST00000614616 TNFSF15O95150 251 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 MGPP08493 103 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 C2orf68Q2NKX9 166 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 ATG4DQ86TL0 474 aaPredicted RBP11.95□□□□□ -0.5
CHD1-212ENST00000614616 SELENOHQ8IZQ5 122 aaKnown RBP11.95□□□□□ -0.5
CHD1-212ENST00000614616 CDCA3Q99618 268 aaPredicted RBP11.95□□□□□ -0.5
CHD1-212ENST00000614616 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 RTP5Q14D33 572 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 C11orf68Q9H3H3 251 aaKnown RBP11.95□□□□□ -0.5
CHD1-212ENST00000614616 BTCP35070 178 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 GAGE2BQ13066 116 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 IZUMO4Q1ZYL8 232 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 GAGE2EQ4V326 116 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 PYY3Q5JQD4 70 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 GAGE2DQ9UEU5 116 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 ARFGEF3Q5TH69 2177 aa11.95□□□□□ -0.5
CHD1-212ENST00000614616 FAM71F2Q6NXP2 309 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 AGBL5Q8NDL9 886 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 ZNF735P0CB33 412 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 C12orf76Q8N812 135 aaPredicted RBP11.94□□□□□ -0.5
CHD1-212ENST00000614616 CXorf66Q5JRM2 361 aaPredicted RBP11.94□□□□□ -0.5
CHD1-212ENST00000614616 FAM19A2Q8N3H0 131 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 OR2Z1Q8NG97 314 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 OR2K2Q8NGT1 345 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 MPC1Q9Y5U8 109 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 FGF16O43320 207 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 TDGF1P3P51864 188 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 DEFB132Q7Z7B7 95 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 MRGPRX1Q96LB2 322 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 TRBV5-7A0A0A0MS05 114 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 IGHV3-20A0A0C4DH32 117 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 RNF222A6NCQ9 220 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 ICAM4Q14773 271 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
CHD1-212ENST00000614616 SPTBN1Q01082 2364 aaKnown RBP11.94□□□□□ -0.5
CHD1-212ENST00000614616 THADAQ6YHU6 1953 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 CA11O75493 328 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
CHD1-212ENST00000614616 FER1L6-AS2Q96M78 137 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 ZNF48Q96MX3 618 aaPredicted RBP11.94□□□□□ -0.5
CHD1-212ENST00000614616 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
CHD1-212ENST00000614616 RND1Q92730 232 aa11.94□□□□□ -0.5
CHD1-212ENST00000614616 MARS2Q96GW9 593 aaKnown RBP11.94□□□□□ -0.5
CHD1-212ENST00000614616 PGFP49763 221 aa11.93□□□□□ -0.5
CHD1-212ENST00000614616 RBM11P57052 281 aaKnown RBP11.93□□□□□ -0.5
CHD1-212ENST00000614616 OCIAD2Q56VL3 154 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms