RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 HEPN1Q6WQI6 88 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 TBC1D26Q86UD7 250 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 Q8N7P7 452 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 GLYATL2Q8WU03 294 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 PPP1R1CQ8WVI7 109 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 ARL11Q969Q4 196 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 C2orf50Q96LR7 162 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 TMEM222Q9H0R3 208 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 PRR13Q9NZ81 148 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 JPT1Q9UK76 154 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 FN1P02751 2386 aaKnown RBP8.23□□□□□ -1.09
UPF1-213ENST00000601981 FXYD6-FXYD2A0A087WZ82 144 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 IGHV1-69DA0A0B4J2H0 117 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 C13orf42A0A1B0GVH6 325 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 DUXBA0A1W2PPF3 345 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 MEX3AA1L020 520 aaKnown RBP8.22□□□□□ -1.09
UPF1-213ENST00000601981 PGLYRP1O75594 196 aaPredicted RBP8.22□□□□□ -1.09
UPF1-213ENST00000601981 FSHBP01225 129 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 IGHV1-69P01742 117 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 HOXB5P09067 269 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 CGB3P0DN86 165 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 CGB7P0DN87 165 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 RPA2P15927 270 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 UCP1P25874 307 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 SSTR5P35346 364 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 DLX6P56179 175 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 LGALS4P56470 323 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 LGALSLQ3ZCW2 172 aaPredicted RBP8.22□□□□□ -1.09
UPF1-213ENST00000601981 TMEM65Q6PI78 240 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 RBMS3Q6XE24 437 aaKnown RBP8.22□□□□□ -1.09
UPF1-213ENST00000601981 C1orf229Q6ZS94 237 aaPredicted RBP8.22□□□□□ -1.09
UPF1-213ENST00000601981 TCF23Q7RTU1 214 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 ZNF645Q8N7E2 425 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 ZBTB34Q8NCN2 500 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 UBALD1Q8TB05 177 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 IL22RA2Q969J5 263 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 SEC22AQ96IW7 307 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 TMEM56Q96MV1 263 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 TP53RKQ96S44 253 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 TMEM133Q9H2Q1 129 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 IDI2-AS1Q9NZ38 188 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 TMEM56-RWDD3S4R434 201 aa8.22□□□□□ -1.09
UPF1-213ENST00000601981 CENPVL3A0A0U1RRI6 287 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 RNF212BA8MTL3 300 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 L7N2F9 121 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 TOR1AO14656 332 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 ITGB1BP1O14713 200 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 MPC2O95563 127 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 IGLV2-14P01704 120 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 OR8U9P0C7N5 309 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 IGHV4-38-2P0DP08 117 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 COX7A1P24310 79 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 F2RP25116 425 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 NFYBP25208 207 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 PSMB6P28072 239 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 IL15RAQ13261 267 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 GNMTQ14749 295 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 SP6Q3SY56 376 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 MIDNQ504T8 468 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 KLF17Q5JT82 389 aaPredicted RBP8.21□□□□□ -1.1
UPF1-213ENST00000601981 PRAMEF5Q5TYX0 476 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 GGNBP1Q5YKI7 109 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 C11orf87Q6NUJ2 197 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 PNKDQ8N490 385 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 OR52L2PQ8NGH6 319 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 OR52M1Q8NGK5 317 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 OR8U1Q8NH10 309 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 ZNF596Q8TC21 504 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 ZNF418Q8TF45 676 aaPredicted RBP8.21□□□□□ -1.1
UPF1-213ENST00000601981 EDARADDQ8WWZ3 215 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 OR10C1Q96KK4 312 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 JMJD8Q96S16 334 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 PARP12Q9H0J9 701 aaKnown RBP8.21□□□□□ -1.1
UPF1-213ENST00000601981 LINC00574Q9H8X3 128 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 OR2S2Q9NQN1 319 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 LIN7CQ9NUP9 197 aaKnown RBP8.21□□□□□ -1.1
UPF1-213ENST00000601981 PAIP2BQ9ULR5 123 aaKnown RBP8.21□□□□□ -1.1
UPF1-213ENST00000601981 FAM96BQ9Y3D0 163 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 TMED3Q9Y3Q3 217 aa8.21□□□□□ -1.1
UPF1-213ENST00000601981 RBM7Q9Y580 266 aaKnown RBP8.21□□□□□ -1.1
UPF1-213ENST00000601981 IGHV3OR16-10A0A075B7F0 116 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 IGHV2-26A0A0B4J1V2 119 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 MPTX1A8MV57 137 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 RNASEK-C17orf49H0YIS7 233 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 NPFFO15130 113 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 ARPC5O15511 151 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 YPEL1O60688 119 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 CDS2O95674 445 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 ARG1P05089 322 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 FBP1P09467 338 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 PET100P0DJ07 73 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 LYL1P12980 280 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 CXCL2P19875 107 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 OMGP23515 440 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 PPP1CCP36873 323 aaKnown RBP8.2□□□□□ -1.1
UPF1-213ENST00000601981 ARHGDIBP52566 201 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 PRRX1P54821 245 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 KLRD1Q13241 179 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 ZNF345Q14585 488 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms