RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PRELID3BQ9Y3B1 194 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 USF3Q68DE3 2245 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 PCNX1Q96RV3 2341 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 PPIAL4EA0A075B759 164 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 hADV38S2A0JD32 116 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 SHISA9B4DS77 424 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 PPIAL4DF5H284 164 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 CCL21O00585 134 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 HPRT1P00492 218 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 IFNA5P01569 189 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 GYPAP02724 150 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 PPIAL4FP0DN26 164 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 PAX9P55771 341 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 LOXL3P58215 753 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 RPL30P62888 115 aaKnown RBP9.34□□□□□ -0.91
LIG3-204ENST00000585740 HBG1P69891 147 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 HBG2P69892 147 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 C17orf58Q2M2W7 97 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 BTNL8Q6UX41 500 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 Q6ZRG5 221 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 Q6ZRM9 215 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 H2BFWTQ7Z2G1 175 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 BPIFCQ8NFQ6 507 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 OR5C1Q8NGR4 320 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 PLPPR2Q96GM1 343 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 PSMG3-AS1Q96PY0 264 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 CIB3Q96Q77 187 aaPredicted RBP9.34□□□□□ -0.91
LIG3-204ENST00000585740 CCL13Q99616 98 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 PPIAL4AQ9Y536 164 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 USP9YO00507 2555 aaPredicted RBP9.34□□□□□ -0.91
LIG3-204ENST00000585740 ICE1Q9Y2F5 2266 aa9.34□□□□□ -0.91
LIG3-204ENST00000585740 C17orf98A8MV24 154 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 DEFB108AA8MXU0 73 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 E7EQL1 145 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 TMEM178BH3BS89 294 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 NDUFA2O43678 99 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 S1PR2O95136 353 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 TMEM50AO95807 157 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 DUTP33316 252 aaKnown RBP9.33□□□□□ -0.92
LIG3-204ENST00000585740 CAMLGP49069 296 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 CCL8P80075 99 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 ZNF816Q0VGE8 651 aaPredicted RBP9.33□□□□□ -0.92
LIG3-204ENST00000585740 CLINT1Q14677 625 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 LTC4SQ16873 150 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 HIST2H2BCQ6DN03 193 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 CLEC9AQ6UXN8 241 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 DMRTC2Q8IXT2 367 aaPredicted RBP9.33□□□□□ -0.92
LIG3-204ENST00000585740 HSD17B11Q8NBQ5 300 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 LFNGQ8NES3 379 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 DEFB108BQ8NET1 73 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 LYPD6BQ8NI32 183 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 RAB39BQ96DA2 213 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 TSNAXQ99598 290 aaKnown RBP9.33□□□□□ -0.92
LIG3-204ENST00000585740 ABHD14AQ9BUJ0 271 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 HRH4Q9H3N8 390 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 GAL3ST2Q9H3Q3 398 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 HSPB7Q9UBY9 170 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 LINC00312Q9Y6C7 94 aa9.33□□□□□ -0.92
LIG3-204ENST00000585740 UTP20O75691 2785 aaKnown RBP9.32□□□□□ -0.92
LIG3-204ENST00000585740 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.32□□□□□ -0.92
LIG3-204ENST00000585740 TMEM218A2RU14 115 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 M0R1X1 148 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 RAMP3O60896 148 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 CST7O76096 145 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 NXPH3O95157 252 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 TSPAN15O95858 294 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 KRASP01116 189 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 PRH1P02810 166 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 OR8U8P0C7N1 319 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 OMGP23515 440 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 ATP6V0CP27449 155 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 G6PCP35575 357 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 THBS3P49746 956 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 UBE2KP61086 200 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 ERVK-16P61578 105 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 TNFRSF9Q07011 255 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 SLC25A24Q6NUK1 477 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 BTNL3Q6UXE8 466 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 DPPA3Q6W0C5 159 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 OR2G3Q8NGZ4 309 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 R3HDM4Q96D70 268 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 NARS2Q96I59 477 aaKnown RBP9.32□□□□□ -0.92
LIG3-204ENST00000585740 S1PR3Q99500 378 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
LIG3-204ENST00000585740 IFI27L2Q9H2X8 130 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 NARFLQ9H6Q4 476 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 TREM1Q9NP99 234 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 KCNJ16Q9NPI9 418 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 C19orf12Q9NSK7 152 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 TMEM106BQ9NUM4 274 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 SLC25A10Q9UBX3 287 aaPredicted RBP9.32□□□□□ -0.92
LIG3-204ENST00000585740 HCFC1P51610 2035 aa9.32□□□□□ -0.92
LIG3-204ENST00000585740 POLEQ07864 2286 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 CREBBPQ92793 2442 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 BTBD17A6NE02 478 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms