RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 LINC00346Q8IVM7 164 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 C1orf174Q8IYL3 243 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 TMEM52Q8NDY8 209 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 MRPL30Q8TCC3 161 aaKnown RBP6.39□□□□□ -1.39
TVP23C-208ENST00000581273 FAM71F1Q96KD3 344 aaPredicted RBP6.39□□□□□ -1.39
TVP23C-208ENST00000581273 YPEL2Q96QA6 119 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF665Q9H7R5 613 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 PATZ1Q9HBE1 687 aaKnown RBP6.39□□□□□ -1.39
TVP23C-208ENST00000581273 RPRMQ9NS64 109 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 ALKBH4Q9NXW9 302 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 IL36GQ9NZH8 169 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF391Q9UJN7 358 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 NXT1Q9UKK6 140 aaKnown RBP6.39□□□□□ -1.39
TVP23C-208ENST00000581273 RARRES3Q9UL19 164 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 ST3GAL6Q9Y274 331 aa6.39□□□□□ -1.39
TVP23C-208ENST00000581273 CUBNO60494 3623 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 IGHV1-69-2A0A0G2JMI3 117 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 KIR2DS1A0A191URI9 304 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 FAM221AA4D161 298 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 LILRA5A6NI73 299 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 C21orf140B9A014 251 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 TMEM150CB9EJG8 249 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 C17orf112F2Z3M2 114 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 J3QR06 171 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 ADAM20O43506 726 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 TRAF3IP2O43734 574 aaPredicted RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF253O75346 499 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 FCGR2AP12318 317 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 COX5AP20674 150 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 IL3RAP26951 378 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 KIR2DS4P43632 304 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 EFNA3P52797 238 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF121P58317 390 aaPredicted RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 CLRN1P58418 232 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 FXYD4P59646 89 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 KIR2DS1Q14954 304 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 RNPS1Q15287 305 aaKnown RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 FBLN7Q53RD9 439 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 OR10J3Q5JRS4 329 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 ETFRF1Q6IPR1 90 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 Q6ZN92 141 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 LHFPL2Q6ZUX7 228 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 TMEM144Q7Z5S9 345 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 BAGE3Q86Y29 109 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 BAGE2Q86Y30 109 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 UEVLDQ8IX04 471 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 SELENOHQ8IZQ5 122 aaKnown RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 Q8NA96 180 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 GATSQ8NAP1 163 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 NECAP1Q8NC96 275 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 OR8B12Q8NGG6 310 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 FLVCR1-AS1Q8TAF5 88 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 DOK4Q8TEW6 326 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 TMEM171Q8WVE6 324 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 OR5P3Q8WZ94 311 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 LSM10Q969L4 123 aaKnown RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 STARD4Q96DR4 205 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 NRTNQ99748 197 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 HSPB9Q9BQS6 159 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 ABHD14AQ9BUJ0 271 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 ELOVL1Q9BW60 279 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 PARLQ9H300 379 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF703Q9H7S9 590 aaPredicted RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 GLRX2Q9NS18 164 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 MRPL27Q9P0M9 148 aaKnown RBP6.38□□□□□ -1.39
TVP23C-208ENST00000581273 PAM16Q9Y3D7 125 aa6.38□□□□□ -1.39
TVP23C-208ENST00000581273 IGHV2OR16-5A0A0B4J2B6 119 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 IGHV5-51A0A0C4DH38 117 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 ANKUB1A6NFN9 424 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 LRRC3CA6NJW4 275 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 DIRC3C9JPN6 131 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 CHST1O43916 411 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 CST7O76096 145 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 PPYP01298 95 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 GZMHP20718 246 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 KITLGP21583 273 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 CAPZBP47756 277 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 CARD18P57730 90 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF154Q13106 437 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 PRSS8Q16651 343 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 SPATA45Q537H7 98 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 NMSQ5H8A3 153 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 FAM78BQ5VT40 261 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 FAM57BQ71RH2 274 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 D2HGDHQ8N465 521 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 TMEM217Q8N7C4 229 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF709Q8N972 641 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 FDCSPQ8NFU4 85 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 OR4F5Q8NH21 305 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 RNASE8Q8TDE3 154 aaKnown RBP6.37□□□□□ -1.39
TVP23C-208ENST00000581273 APH1AQ96BI3 265 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 RPUSD4Q96CM3 377 aaKnown RBP6.37□□□□□ -1.39
TVP23C-208ENST00000581273 OR4F4Q96R69 305 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 KCNIP2Q9NS61 270 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 MCTS1Q9ULC4 181 aaKnown RBP6.37□□□□□ -1.39
TVP23C-208ENST00000581273 LY96Q9Y6Y9 160 aa6.37□□□□□ -1.39
TVP23C-208ENST00000581273 CBY3A6NI87 242 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 CD300LBA8K4G0 201 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 C17orf105B2RV13 164 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms