RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 Q8N6K4 173 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 OR8H1Q8NGG4 311 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 UBALD1Q8TB05 177 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 MRGPRDQ8TDS7 321 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 NUDCD2Q8WVJ2 157 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 DCUN1D4Q92564 292 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 CMTM3Q96MX0 182 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 CMSS1Q9BQ75 279 aaKnown RBP5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 OR51J1Q9H342 316 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 AUNIPQ9H7T9 357 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 DIABLOQ9NR28 239 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 EXTL2Q9UBQ6 330 aa5.53□□□□□ -1.52
CDK5RAP3-209ENST00000578663 LINC01548A6NM66 108 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 C12orf77C9JDV5 145 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 C15orf65H3BRN8 121 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 XRCC3O43542 346 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 CA11O75493 328 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 NAPSAO96009 420 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGKV1D-33P01593 117 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGKV1-33P01594 117 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 HLA-DQB1P01920 261 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 FCGR3AP08637 254 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 GSTP1P09211 210 aaKnown RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 CD3GP09693 182 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 CGB3P0DN86 165 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 CGB7P0DN87 165 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 SSTR5P35346 364 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 GNB1P62873 340 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ARFRP1Q13795 201 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 KIAA0141Q14154 515 aaPredicted RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 LTC4SQ16873 150 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 TMEM69Q5SWH9 247 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 UTF1Q5T230 341 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 HACD4Q5VWC8 232 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 FAM53AQ6NSI3 398 aaPredicted RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ZNF880Q6PDB4 577 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 SNX29P2Q8IUI4 249 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ZNF491Q8N8L2 437 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 Q8N9W7 124 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 RFESDQ8TAC1 157 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 SETD6Q8TBK2 473 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 MAFIPQ8WZ33 124 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 S100A16Q96FQ6 103 aaKnown RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 NCOR1P1Q9H4R4 102 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 GNB4Q9HAV0 340 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 CHMP1AQ9HD42 196 aaPredicted RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 C12orf4Q9NQ89 552 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 MBNL3Q9NUK0 354 aaKnown RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 CALYQ9NYX4 217 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 OR6C3Q9NZP0 311 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ZNF230Q9UIE0 474 aaPredicted RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ADAM30Q9UKF2 790 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 TRAPPC2LQ9UL33 140 aa5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 MRPS7Q9Y2R9 242 aaKnown RBP5.52□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGKV1D-8A0A087WSZ0 117 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 TRBV6-6A0A0A6YYG2 114 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 KBTBD11-OT1A0A1B0GTJ5 212 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 FAM172BPA6NC97 362 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 MEIS3P1A6NDR6 274 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ZNF729A6NN14 1252 aaPredicted RBP5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 J3QR06 171 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ARPC1BO15143 372 aaKnown RBP5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGLV1-51P01701 117 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 FCER2P06734 321 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 PPIFP30405 207 aaKnown RBP5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 TNFSF8P32971 234 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 GNG2P59768 71 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 HLA-DRB3P79483 266 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 PITPNAQ00169 270 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ZNF816Q0VGE8 651 aaPredicted RBP5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 HNF4GQ14541 408 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 HMGN3Q15651 99 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 RNASE12Q5GAN4 147 aaKnown RBP5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 C6orf183Q5T699 404 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 GVQW1Q8N7I0 195 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 OR1L1Q8NH94 360 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ARPC1AQ92747 370 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 DLX4Q92988 240 aaPredicted RBP5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ARL11Q969Q4 196 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 DIRAS2Q96HU8 199 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 KIRREL1Q96J84 757 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 EAF1Q96JC9 268 aaPredicted RBP5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 OR4C12Q96R67 309 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 HIPK2Q9H2X6 1198 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 TAF9BQ9HBM6 251 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 Q9N2K0 584 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 A3GALT2U3KPV4 340 aa5.51□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGHV3-43A0A0B4J1X8 118 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGKV1-6A0A0C4DH72 117 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 NUPR2A6NF83 97 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 NCBP2LA6PVI3 153 aaKnown RBP5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 NPIPB11E5RHQ5 1161 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 LINC01619G3V211 115 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 ORC5O43913 435 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 DEDDO75618 318 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGLV1-40P01703 118 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 HBZP02008 142 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 SCTP09683 121 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 IGHV3-43DP0DP04 118 aa5.5□□□□□ -1.53
CDK5RAP3-209ENST00000578663 DTYMKP23919 212 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms