RNA–Protein interactions for RNA: ENST00000563984.1

VPS35-205, Transcript of VPS35, retromer complex component, humanhuman

TSL 2

Gene VPS35, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-205ENST00000563984 ARHGAP5Q13017 1502 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 UGGT1Q9NYU2 1555 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 DIP2CQ9Y2E4 1556 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 USP6P35125 1406 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 DHRS12A0PJE2 317 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 C7orf77A4D0Y5 90 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 EEF1E1-BLOC1S5C9J1V9 151 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 FNDC10F2Z333 226 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 EEF1E1O43324 174 aaKnown RBP4.16□□□□□ -1.74
VPS35-205ENST00000563984 EFNA2O43921 213 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 LINC00032P0C843 101 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 PGA3P0DJD8 388 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 CTSEP14091 401 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ARL2P36404 184 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 POLR2IP36954 125 aaKnown RBP4.16□□□□□ -1.74
VPS35-205ENST00000563984 INPP1P49441 399 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 PPP1CBP62140 327 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 SYT14P1Q58G82 188 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ZNF542PQ5EBM4 170 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 TMEM255AQ5JRV8 349 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 MEIG1Q5JSS6 88 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ZNF660Q6AZW8 331 aaPredicted RBP4.16□□□□□ -1.74
VPS35-205ENST00000563984 AMMECR1LQ6DCA0 310 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 OR2T5Q6IEZ7 315 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 UFSP1Q6NVU6 142 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ALKAL1Q6UXT8 129 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 RNF175Q8N4F7 328 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 THAP8Q8NA92 274 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ADAD2Q8NCV1 583 aaKnown RBP4.16□□□□□ -1.74
VPS35-205ENST00000563984 GPR26Q8NDV2 337 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 OR11H7Q8NGC8 314 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 OR8B12Q8NGG6 310 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 OR5AR1Q8NGP9 310 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 OR2T35Q8NGX2 323 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 OR2T29Q8NH02 315 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 CLDN23Q96B33 292 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ZNF681Q96N22 645 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 AP1S3Q96PC3 154 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 FOXC2Q99958 501 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 C19orf24Q9BVV8 132 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 CHST6Q9GZX3 395 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 C5orf66Q9H5L9 145 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 RPRMQ9NS64 109 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 SLC2A6Q9UGQ3 507 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 SCML2Q9UQR0 700 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 WDR83OSQ9Y284 106 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ZNF443Q9Y2A4 671 aaPredicted RBP4.16□□□□□ -1.74
VPS35-205ENST00000563984 NOP16Q9Y3C1 178 aaKnown RBP4.16□□□□□ -1.74
VPS35-205ENST00000563984 TPRKBQ9Y3C4 175 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 OR1A2Q9Y585 309 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 R4GN57 208 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 MYH8P13535 1937 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 SCN11AQ9UI33 1791 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 LRP6O75581 1613 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 ROBO1Q9Y6N7 1651 aa4.16□□□□□ -1.74
VPS35-205ENST00000563984 MYO3AQ8NEV4 1616 aa4.15□□□□□ -1.74
VPS35-205ENST00000563984 IGLV5-37A0A075B6J1 123 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 A0A1B0GTH9 108 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 LOC102725191A0A1B0GVB3 256 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 IGLC7A0M8Q6 106 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 TMEM235A6NFC5 223 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 RBFOX3A6NFN3 312 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 CD300LBA8K4G0 201 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 M0R1B8 84 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 SH2D1BO14796 132 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 NPFFO15130 113 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 RER1O15258 196 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 LYRM1O43325 122 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 BCL2L11O43521 198 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 CD5LO43866 347 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 REG1AP05451 166 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 OR5AL1P0C617 328 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 LINC00694P0DN24 101 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 TFPIP10646 304 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 KLK2P20151 261 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 GPR183P32249 361 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 ZNF93P35789 620 aaPredicted RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 DIO3P55073 304 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 ZNF92Q03936 586 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 KLRD1Q13241 179 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 GGTLC2Q14390 218 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 OR1C1Q15619 314 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 ZNF684Q5T5D7 378 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 TSPO2Q5TGU0 170 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 OLFML2AQ68BL7 652 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 Q6Q795 121 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 GDPGP1Q6ZNW5 385 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 MRPL55Q7Z7F7 128 aaKnown RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 SFTPA2Q8IWL1 248 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 DEFB107AQ8IZN7 70 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 ZNF615Q8N8J6 731 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 PRELID2Q8N945 189 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 OR52R1Q8NGF1 315 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 RNF128Q8TEB7 428 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 ARPC1AQ92747 370 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 DYNLL2Q96FJ2 89 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 PGLYRP3Q96LB9 341 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 BMFQ96LC9 184 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 IMMP2LQ96T52 175 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms