RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 TRAV8-4A0A0B4J246 113 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 OR11H12B2RN74 326 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 MST1LQ2TV78 715 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 SLC35E4Q6ICL7 350 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ASCL4Q6XD76 172 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 OR11H1Q8NG94 326 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 OR4F17Q8NGA8 305 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 OR11H2Q8NH07 326 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 PPIL1Q9Y3C6 166 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 MANSC4A6NHS7 340 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 TOMM40O96008 361 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ARL14EPLP0DKL9 152 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 LHX2P50458 406 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 DLX1P56177 255 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 TMEM164Q5U3C3 297 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ADAMTSL5Q6ZMM2 481 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 OR1K1Q8NGR3 316 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 A0A1W2PP11 408 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 hADV38S2A0JD32 116 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 SPINT1O43278 529 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 IFITM1P13164 125 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 CRYBB3P26998 211 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 CFPP27918 469 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 RPS27P42677 84 aaKnown RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 DEFB132Q7Z7B7 95 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 LYPD6BQ8NI32 183 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 GPR146Q96CH1 333 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 OSTCQ9NRP0 149 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ZNF816Q0VGE8 651 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 RTP5Q14D33 572 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 TCF24Q7RTU0 167 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ZNF418Q8TF45 676 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 RTBDNQ9BSG5 229 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 HS3ST3B1Q9Y662 390 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 DOCK5Q9H7D0 1870 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 TRAV5A0A0B4J249 113 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 KIR3DS1Q14943 382 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 DCAF12Q5T6F0 453 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 TPSD1Q9BZJ3 242 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 NPVFQ9HCQ7 196 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 KLF12Q9Y4X4 402 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 A0A1B0GTH9 108 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 SSTR5P35346 364 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 RBX1P62877 108 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 ST6GALNAC3Q8NDV1 305 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 MRPL32Q9BYC8 188 aaKnown RBP5.41□□□□□ -1.54
CLK3-212ENST00000563418 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.41□□□□□ -1.54
CLK3-212ENST00000563418 NKX2-8O15522 239 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 CYB561P49447 251 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 SHISA6Q6ZSJ9 500 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 MS4A4AQ96JQ5 239 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 F11RQ9Y624 299 aaKnown RBP5.41□□□□□ -1.54
CLK3-212ENST00000563418 C9JCJ5 164 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 OR1L1Q8NH94 360 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 RND1Q92730 232 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 H0YIZ8 118 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 OR10AC1Q8NH08 325 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 ZNF735P0CB33 412 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 CTLA4P16410 223 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 TIMP3P35625 211 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 CENPWQ5EE01 88 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 BATF2Q8N1L9 274 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 ALKBH3Q96Q83 286 aaPredicted RBP5.41□□□□□ -1.54
CLK3-212ENST00000563418 TMEM14DPA8MWL7 114 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 FCN3O75636 299 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 AREGP15514 252 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 FKBP1BP68106 108 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 ZP4Q12836 540 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 ZXDCQ2QGD7 858 aaPredicted RBP5.41□□□□□ -1.54
CLK3-212ENST00000563418 SPRED2Q7Z698 418 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 RFLNBQ8N5W9 214 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 WDR31Q8NA23 367 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 A0A0G2JMZ2 1700 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 LRRC37A2A6NM11 1700 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 LRRC37AA6NMS7 1700 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 OOEPA6NGQ2 149 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 LRRC30A6NM36 301 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 M0R3E3 92 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 SPRY1O43609 319 aaPredicted RBP5.41□□□□□ -1.54
CLK3-212ENST00000563418 MYBPHQ13203 477 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 GCSAMLQ5JQS6 135 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 KLHDC3Q9BQ90 382 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 GNB4Q9HAV0 340 aa5.41□□□□□ -1.54
CLK3-212ENST00000563418 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.4□□□□□ -1.54
CLK3-212ENST00000563418 FAM219BQ5XKK7 198 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 IL36RNQ9UBH0 155 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 DUX1O43812 170 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 GABRG2P18507 467 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 RPS4XP62701 263 aaKnown RBP5.4□□□□□ -1.54
CLK3-212ENST00000563418 B4GALNT1Q00973 533 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 TCEAL8Q8IYN2 117 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 LINC01465Q8N7H1 131 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 STPG4Q8N801 248 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 OR8B12Q8NGG6 310 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 PRSS27Q9BQR3 290 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 ATP5LO75964 103 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 P04436 131 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 FAM182BQ5T319 152 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 RPL31P62899 125 aaKnown RBP5.4□□□□□ -1.54
CLK3-212ENST00000563418 SPRYD7Q5W111 196 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms