RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 OR2W1Q9Y3N9 320 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 IGKV1D-13A0A0B4J2D9 117 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 MEIS3P1A6NDR6 274 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 OR5H14A6NHG9 310 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 LINC01548A6NM66 108 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 IGHG2P01859 326 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 IGKV1-13P0DP09 117 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 CNTFRP26992 372 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 MC5RP33032 325 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 VDAC2P45880 294 aaPredicted RBP7.63□□□□□ -1.19
SRP54-210ENST00000556380 ACTBP60709 375 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 EIF4EBP1Q13541 118 aaPredicted RBP7.63□□□□□ -1.19
SRP54-210ENST00000556380 ZNF660Q6AZW8 331 aaPredicted RBP7.63□□□□□ -1.19
SRP54-210ENST00000556380 FAM131AQ6UXB0 335 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 OR5AP2Q8NGF4 316 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 C15orf40Q8WUR7 153 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 ABHD1Q96SE0 405 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 OR2D2Q9H210 308 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 SCPEP1Q9HB40 452 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 RABL2AQ9UBK7 228 aaPredicted RBP7.63□□□□□ -1.19
SRP54-210ENST00000556380 RABL2BQ9UNT1 228 aa7.63□□□□□ -1.19
SRP54-210ENST00000556380 MRPS7Q9Y2R9 242 aaKnown RBP7.63□□□□□ -1.19
SRP54-210ENST00000556380 NOTCH3Q9UM47 2321 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 NCBP2LA6PVI3 153 aaKnown RBP7.62□□□□□ -1.19
SRP54-210ENST00000556380 M0R1X1 148 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 SULT1C2O00338 296 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 NDUFA3O95167 84 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 IGKV1-16P04430 117 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 FCER2P06734 321 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 OR5H8P0DN80 308 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 VSIG10L2P0DP72 767 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 AADACP22760 399 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 FCGR2CP31995 323 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 LUMP51884 338 aaPredicted RBP7.62□□□□□ -1.19
SRP54-210ENST00000556380 TCTEX1D4Q5JR98 221 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 DHRS11Q6UWP2 260 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 OVCH2Q7RTZ1 564 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 SNX29P2Q8IUI4 249 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 GIMAP1Q8WWP7 306 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 DDB2Q92466 427 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 RNF5Q99942 180 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 SOSTQ9BQB4 213 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 LIN7CQ9NUP9 197 aaKnown RBP7.62□□□□□ -1.19
SRP54-210ENST00000556380 EXTL2Q9UBQ6 330 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 ZNF107Q9UII5 783 aaPredicted RBP7.62□□□□□ -1.19
SRP54-210ENST00000556380 WASHC3Q9Y3C0 194 aa7.62□□□□□ -1.19
SRP54-210ENST00000556380 PLXNB1O43157 2135 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 LINC00473A8K010 186 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 FAM25AB3EWG3 89 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 FAM25CB3EWG5 89 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 FAM25GB3EWG6 89 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 RBBP9O75884 186 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 CD28P10747 220 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 DUTP33316 252 aaKnown RBP7.61□□□□□ -1.19
SRP54-210ENST00000556380 RFX2P48378 723 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 ARPC4P59998 168 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 CD83Q01151 205 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 DYRK1AQ13627 763 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 CDK10Q15131 360 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 C5orf64Q2M2E5 130 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 C9orf152Q5JTZ5 239 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 PRR31Q5SQ13 230 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 HIST2H2BDQ6DRA6 164 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 CDPF1Q6NVV7 123 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 LAX1Q8IWV1 398 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 ZNF645Q8N7E2 425 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 SGMS2Q8NHU3 365 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 RASL11BQ9BPW5 248 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 HSPB9Q9BQS6 159 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 IFT46Q9NQC8 304 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 NECAP2Q9NVZ3 263 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 NDUFA13Q9P0J0 144 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 RBMX2Q9Y388 322 aaKnown RBP7.61□□□□□ -1.19
SRP54-210ENST00000556380 MEGF8Q7Z7M0 2845 aa7.61□□□□□ -1.19
SRP54-210ENST00000556380 SRRM4A7MD48 611 aaKnown RBP7.6□□□□□ -1.19
SRP54-210ENST00000556380 H7C2Y5 167 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 J3QRK9 145 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 FCN1O00602 326 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 RRHO14718 337 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 NBR2O15453 112 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 SLC22A5O76082 557 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 PPYP01298 95 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 IGLV2-23P01705 113 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 HLA-DRB1P01911 266 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 CRYGBP07316 175 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 HLA-DMAP28067 261 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 THBS3P49746 956 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 BRWD1-AS2P59051 145 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 RPL30P62888 115 aaKnown RBP7.6□□□□□ -1.19
SRP54-210ENST00000556380 TAGLNQ01995 201 aaKnown RBP7.6□□□□□ -1.19
SRP54-210ENST00000556380 PSG5Q15238 335 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 MMDQ15546 238 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 MSMO1Q15800 293 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 TMEM177Q53S58 311 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 C10orf99Q6UWK7 81 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 SLC35E3Q7Z769 313 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 PDPNQ86YL7 162 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 C11orf44Q8N8P7 122 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 OR5AU1Q8NGC0 362 aa7.6□□□□□ -1.19
SRP54-210ENST00000556380 OR52I2Q8NH67 350 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms