RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 VENTXO95231 258 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 NUDT3O95989 172 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 GCGP01275 180 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 OR13C7P0DN81 318 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 BCL2P10415 239 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 COX5BP10606 129 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 CBR1P16152 277 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 AADACP22760 399 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 MDH2P40926 338 aaKnown RBP4.99□□□□□ -1.61
VPS33B-203ENST00000554264 PTGDSP41222 190 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 NPBWR2P48146 333 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 MSMO1Q15800 293 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 SSX2Q16385 188 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ATP6V1FQ16864 119 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ACOT6Q3I5F7 207 aaPredicted RBP4.99□□□□□ -1.61
VPS33B-203ENST00000554264 Q3ZCU0 254 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 IGSF11Q5DX21 431 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF766Q5HY98 468 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 COA6Q5JTJ3 125 aaKnown RBP4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ACER2Q5QJU3 275 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 DTX2Q86UW9 622 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 RPS19BP1Q86WX3 136 aaKnown RBP4.99□□□□□ -1.61
VPS33B-203ENST00000554264 MKXQ8IYA7 352 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 TCTEX1D1Q8N7M0 179 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 SLC35G3Q8N808 338 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 OR10AD1Q8NGE0 317 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 OR5L1Q8NGL2 311 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 FAM216AQ8WUB2 273 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.99□□□□□ -1.61
VPS33B-203ENST00000554264 SPSB4Q96A44 273 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ISOC2Q96AB3 205 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 FAM210BQ96KR6 192 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 FAAP24Q9BTP7 215 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 WFDC1Q9HC57 220 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 MANBALQ9NQG1 85 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF319Q9P2F9 582 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 NAT8Q9UHE5 227 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 VAX2Q9UIW0 290 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ST3GAL6Q9Y274 331 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 MRPS18CQ9Y3D5 142 aaKnown RBP4.99□□□□□ -1.61
VPS33B-203ENST00000554264 PCNX3Q9H6A9 2034 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 CNTRLQ7Z7A1 2325 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 NCOA6Q14686 2063 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 hCG_38984A0A1B0GV85 526 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 A0A1W2PP11 408 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 A0A1W2PPE3 182 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SYNGR3O43761 229 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 EFNA2O43921 213 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 PRKNO60260 465 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 CBR3O75828 277 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 HLA-HP01893 362 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 ARG1P05089 322 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 IGFBP2P18065 325 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 DDTP30046 118 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 CCKARP32238 428 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 CDAP32320 146 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 PPP1CCP36873 323 aaKnown RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 NDUFA6P56556 154 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 FAM3BP58499 235 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 FXYD4P59646 89 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 RPS16P62249 146 aaKnown RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 PMP22Q01453 160 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 PRDX4Q13162 271 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 HYAL4Q2M3T9 481 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 NMSQ5H8A3 153 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 OTPQ5XKR4 325 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 CARD17Q5XLA6 110 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SLC25A24Q6NUK1 477 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SPSB3Q6PJ21 355 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 CYP2G1PQ6ZSU1 146 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 LANCL3Q6ZV70 420 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SSX9Q7RTT3 188 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 C1QL2Q7Z5L3 287 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM183AQ8IXX5 376 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 PRSS58Q8IYP2 241 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SELENOHQ8IZQ5 122 aaKnown RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM178AQ8NBL3 297 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 OR10A7Q8NGE5 316 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 OR52M1Q8NGK5 317 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 OR5D18Q8NGL1 313 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 OR5C1Q8NGR4 320 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 NTN5Q8WTR8 489 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 Q8WTZ3 238 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 S100PBPQ96BU1 408 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SGCZQ96LD1 299 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 OR5B12Q96R08 314 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 RASL10BQ96S79 203 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 IMMP2LQ96T52 175 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 TXNDC17Q9BRA2 123 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 PYGO2Q9BRQ0 406 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 RBM24Q9BX46 236 aaKnown RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 ACTR3CQ9C0K3 210 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-203ENST00000554264 KLK15Q9H2R5 256 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF442Q9H7R0 627 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SRD5A3Q9H8P0 318 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 CALHM2Q9HA72 323 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM38BQ9NVV0 291 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 SPG11Q96JI7 2443 aa4.98□□□□□ -1.61
VPS33B-203ENST00000554264 DOCK10Q96BY6 2186 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms