RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 OR5D13Q8NGL4 314 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 RPRMQ9NS64 109 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A10PA6NDY2 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A18PA6NE21 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A16PA6NEW6 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A20PA6NIJ5 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A8PA6NJQ4 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A7PA6NKC0 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A22PA8MWA6 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A12PA8MX19 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A5PA8MXJ8 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A23PA8MXZ1 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 SYNGR2O43760 224 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A15PP0C7V4 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A13PP0C7W8 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A14PP0C7W9 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM90A24PP0C7X0 464 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 HIST1H1BP16401 226 aaKnown RBP13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 KHDC3LQ587J8 217 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 ZNRD1Q9P1U0 126 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 DSCAMO60469 2012 aa13.23□□□□□ -0.29
SNRNP70-203ENST00000544278 SPCS3P61009 180 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 ERVK11-1P61568 191 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 ZNF266Q14584 549 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 WDR82Q6UXN9 313 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 FAM185AQ8N0U4 392 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 SNRNP40Q96DI7 357 aaKnown RBP13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 LOXL4Q96JB6 756 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 RALYQ9UKM9 306 aaKnown RBP13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 KPTNQ9Y664 436 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 HCFC1P51610 2035 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 S100GP29377 79 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 SRPXP78539 464 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 SEM1Q6ZVN7 128 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 PKIBQ9C010 78 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 SLC25A31Q9H0C2 315 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 POLDIP2Q9Y2S7 368 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 IGHV1-18A0A0C4DH31 117 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 PITX3O75364 302 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 CTXN2P0C2S0 81 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 RAC2P15153 192 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 DKK4Q9UBT3 224 aa13.22□□□□□ -0.29
SNRNP70-203ENST00000544278 RBFOX3A6NFN3 312 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 LINC00473A8K010 186 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 PPP1R2P9O14990 202 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 TRGC2P03986 189 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 GCH1P30793 250 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 ZG16O60844 167 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 RAB11AP62491 216 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 RPL23AP62750 156 aaKnown RBP13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 ANKRD39Q53RE8 183 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 CD177Q8N6Q3 437 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 OR5T1Q8NG75 326 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 GATAD1Q8WUU5 269 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 OR4C12Q96R67 309 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 KCNIP1Q9NZI2 227 aa13.21□□□□□ -0.29
SNRNP70-203ENST00000544278 CYB5BO43169 146 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 GALMQ96C23 342 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 SLC35B3Q9H1N7 401 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 TGIF2-C20orf24A0A0A6YYL0 155 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 IGHV2OR16-5A0A0B4J2B6 119 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 RPS23P62266 143 aaKnown RBP13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 FAM27E3Q08E93 113 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 ACSF3Q4G176 576 aaPredicted RBP13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 MOGAT3Q86VF5 341 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 OR8G5Q8NG78 346 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 STARD4Q96DR4 205 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 CLEC18AA5D8T8 446 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 CXCL1P09341 107 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 BRWD1-AS2P59051 145 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 RPL39P5Q59GN2 51 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 CLEC18CQ8NCF0 446 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 NINJ1Q92982 152 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 ATP5SQ99766 215 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 SLC25A22Q9H936 323 aa13.2□□□□□ -0.3
SNRNP70-203ENST00000544278 TRAV17A0A0B4J275 112 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 TNFSF13O75888 250 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 IFNA5P01569 189 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 OPN1MWP04001 364 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 AURKAIP1Q9NWT8 199 aaPredicted RBP13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 KLK10O43240 276 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 MBP02144 154 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF726P1Q15940 193 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 ACP7Q6ZNF0 438 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 LYPD6BQ8NI32 183 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 CABLES2Q9BTV7 478 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 RIMS4Q9H426 269 aaPredicted RBP13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 RBKSQ9H477 322 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 GNG12Q9UBI6 72 aa13.19□□□□□ -0.3
SNRNP70-203ENST00000544278 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 H3BQ15 152 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 EREGO14944 169 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 MYOD1P15172 320 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF25P17030 456 aaPredicted RBP13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 PRB3Q04118 309 aaPredicted RBP13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF880Q6PDB4 577 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 Q6ZS49 121 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms