RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 TMEM171Q8WVE6 324 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 KIRREL1Q96J84 757 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 C18orf12Q96KH6 178 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 MBNL3Q9NUK0 354 aaKnown RBP8.11□□□□□ -1.11
CLIP1-212ENST00000540304 TUBD1Q9UJT1 453 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 WIPI2Q9Y4P8 454 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 NCOR2Q9Y618 2525 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 IGLV3-9A0A075B6K5 115 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 PSPNO60542 156 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 DAOP14920 347 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 CD40P25942 277 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 COMPP49747 757 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-212ENST00000540304 S100A10P60903 97 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 ZNF616Q08AN1 781 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 TBC1D26Q86UD7 250 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 C11orf42Q8N5U0 333 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 HSD17B11Q8NBQ5 300 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 LRRC29Q8WV35 223 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 IL1F10Q8WWZ1 152 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 TP53RKQ96S44 253 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 JKAMPQ9P055 326 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 DOK5Q9P104 306 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 FBXO7Q9Y3I1 522 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 OR2W1Q9Y3N9 320 aa8.11□□□□□ -1.11
CLIP1-212ENST00000540304 CACNA1DQ01668 2161 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 TMEM30CPA0ZSE6 113 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 FGF7P21781 194 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 SELENOTP62341 195 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 HMGN3Q15651 99 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 C22orf34Q6ZV56 151 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 CMTM1Q8IZ96 169 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 CCL28Q9NRJ3 127 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 C20orf202A1L168 122 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 IFNL4K9M1U5 179 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 HSD17B6O14756 317 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 SOD3P08294 240 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 FABP4P15090 132 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 SLC35E4Q6ICL7 350 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 LYZL2Q7Z4W2 148 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 RRNAD1Q96FB5 475 aaKnown RBP8.1□□□□□ -1.11
CLIP1-212ENST00000540304 TMEM56Q96MV1 263 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 SEC11CQ9BY50 192 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 TMEM222Q9H0R3 208 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 SLC35D1Q9NTN3 355 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 TMEM56-RWDD3S4R434 201 aa8.1□□□□□ -1.11
CLIP1-212ENST00000540304 S100GP29377 79 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 LUMP51884 338 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-212ENST00000540304 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 NUP37Q8NFH4 326 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 AQP10Q96PS8 301 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 OR2V2Q96R30 315 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 ZNF471Q9BX82 626 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-212ENST00000540304 HIPK2Q9H2X6 1198 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 TAF9BQ9HBM6 251 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 KCNIP1Q9NZI2 227 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 OR1A1Q9P1Q5 309 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 ERRFI1Q9UJM3 462 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-212ENST00000540304 UBE2J1Q9Y385 318 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-212ENST00000540304 TMED3Q9Y3Q3 217 aa8.09□□□□□ -1.11
CLIP1-212ENST00000540304 SEC14L6B5MCN3 397 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 F5H0A9 414 aaPredicted RBP8.09□□□□□ -1.12
CLIP1-212ENST00000540304 LIPFP07098 398 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 CFHR2P36980 270 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 TMEM268Q5VZI3 342 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 FAM90A1Q86YD7 464 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 SLC35G3Q8N808 338 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 OR10V1Q8NGI7 309 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 OR8U1Q8NH10 309 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 RND1Q92730 232 aa8.09□□□□□ -1.12
CLIP1-212ENST00000540304 PKDREJQ9NTG1 2253 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 LOC105371242A0A075B767 164 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 MSGN1A6NI15 193 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 SRRM5B3KS81 715 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-212ENST00000540304 SPRY3O43610 288 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 DEDDO75618 318 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 IL6RP08887 468 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-212ENST00000540304 EGR1P18146 543 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 TFPI2P48307 235 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 CAMLGP49069 296 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 COL10A1Q03692 680 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 HIST3H2BBQ8N257 126 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 OR52M1Q8NGK5 317 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 PHYHIPLQ96FC7 376 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 RBM7Q9Y580 266 aaKnown RBP8.08□□□□□ -1.12
CLIP1-212ENST00000540304 OOEPA6NGQ2 149 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 H0Y980 276 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 PGLYRP1O75594 196 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-212ENST00000540304 UCP1P25874 307 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 BRS3P32247 399 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 RPL19P84098 196 aaKnown RBP8.08□□□□□ -1.12
CLIP1-212ENST00000540304 AESQ08117 197 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 TESK1Q15569 626 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 BTNL3Q6UXE8 466 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 WFDC8Q8IUA0 241 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 ZNF695Q8IW36 515 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 COQ2Q96H96 371 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms