RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ACSM6Q6P461 480 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 STRADBQ9C0K7 418 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 CLCF1Q9UBD9 225 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 IGLV3-12A0A075B6K2 115 aa11□□□□□ -0.65
MSH6-210ENST00000540021 TRBV24-1A0A075B6N3 115 aa11□□□□□ -0.65
MSH6-210ENST00000540021 NAPSAO96009 420 aa11□□□□□ -0.65
MSH6-210ENST00000540021 VKORC1L1Q8N0U8 176 aa11□□□□□ -0.65
MSH6-210ENST00000540021 MPC1Q9Y5U8 109 aa11□□□□□ -0.65
MSH6-210ENST00000540021 J3QT63 122 aa11□□□□□ -0.65
MSH6-210ENST00000540021 SLC17A3O00476 420 aa11□□□□□ -0.65
MSH6-210ENST00000540021 RAMP3O60896 148 aa11□□□□□ -0.65
MSH6-210ENST00000540021 RPLP1P05386 114 aaKnown RBP11□□□□□ -0.65
MSH6-210ENST00000540021 SSX7Q7RTT5 188 aa11□□□□□ -0.65
MSH6-210ENST00000540021 C17orf82Q86X59 251 aaPredicted RBP11□□□□□ -0.65
MSH6-210ENST00000540021 TMEM256Q8N2U0 113 aa11□□□□□ -0.65
MSH6-210ENST00000540021 OR5AU1Q8NGC0 362 aa11□□□□□ -0.65
MSH6-210ENST00000540021 PSMG3Q9BT73 122 aaPredicted RBP11□□□□□ -0.65
MSH6-210ENST00000540021 LRFN3Q9BTN0 628 aa11□□□□□ -0.65
MSH6-210ENST00000540021 IGKV1-6A0A0C4DH72 117 aa11□□□□□ -0.65
MSH6-210ENST00000540021 SPCS3P61009 180 aa11□□□□□ -0.65
MSH6-210ENST00000540021 TIGITQ495A1 244 aa11□□□□□ -0.65
MSH6-210ENST00000540021 MIC13Q5XKP0 118 aa11□□□□□ -0.65
MSH6-210ENST00000540021 MOB1BQ7L9L4 216 aa11□□□□□ -0.65
MSH6-210ENST00000540021 OR1L6Q8NGR2 347 aa11□□□□□ -0.65
MSH6-210ENST00000540021 TCF21O43680 179 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 HAND1O96004 215 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 NTF4P34130 210 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 PAX9P55771 341 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 CISD2Q8N5K1 135 aaKnown RBP10.99□□□□□ -0.65
MSH6-210ENST00000540021 OR4P4Q8NGL7 312 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 R3HDM4Q96D70 268 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 OR1C1Q15619 314 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 ATP6V1FQ16864 119 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 C6orf15Q6UXA7 325 aaPredicted RBP10.99□□□□□ -0.65
MSH6-210ENST00000540021 DERL1Q9BUN8 251 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 UBE2ZQ9H832 354 aaPredicted RBP10.99□□□□□ -0.65
MSH6-210ENST00000540021 IL36GQ9NZH8 169 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 IGLV3-32A0A0A0MS00 114 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 ODAMA1E959 279 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 LAMTOR5O43504 91 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 LILRA1O75019 489 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 ZNF253O75346 499 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 IL3RAP26951 378 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 CD1BP29016 333 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 GNB2P62879 340 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 ZNF726P1Q15940 193 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 MDP1Q86V88 176 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 OR5R1Q8NH85 324 aa10.99□□□□□ -0.65
MSH6-210ENST00000540021 TRAV24A0A0B4J272 114 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 MT-CO3P00414 261 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 IGKV1-5P01602 117 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 HNRNPA3P51991 378 aaKnown RBP10.98□□□□□ -0.65
MSH6-210ENST00000540021 LINC00205P59089 165 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 SSC4DQ8WTU2 575 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 TAAR6Q96RI8 345 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 REPIN1Q9BWE0 567 aaKnown RBP10.98□□□□□ -0.65
MSH6-210ENST00000540021 PRDM14Q9GZV8 571 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 OR6C3Q9NZP0 311 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 CRIM1Q9NZV1 1036 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 PRR14LQ5THK1 2151 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 TMEM250H0YL14 139 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 Q6ZN92 141 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 ATOH7Q8N100 152 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 PLPPR1Q8TBJ4 325 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 S1PR3Q99500 378 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 ZNF331Q9NQX6 463 aaPredicted RBP10.98□□□□□ -0.65
MSH6-210ENST00000540021 DECR2Q9NUI1 292 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 TCFL5Q9UL49 500 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 WNT9BO14905 357 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 ARL14EPLP0DKL9 152 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 LBHQ53QV2 105 aaPredicted RBP10.98□□□□□ -0.65
MSH6-210ENST00000540021 HES3Q5TGS1 186 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 SCRT1Q9BWW7 348 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 LOXL2Q9Y4K0 774 aa10.98□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A10PA6NDY2 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A18PA6NE21 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A16PA6NEW6 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A20PA6NIJ5 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A8PA6NJQ4 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A7PA6NKC0 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A22PA8MWA6 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A12PA8MX19 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A5PA8MXJ8 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A23PA8MXZ1 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 HBZP02008 142 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 UMODP07911 640 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A15PP0C7V4 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A13PP0C7W8 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A14PP0C7W9 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM90A24PP0C7X0 464 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 CEACAM1P13688 526 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 UCP2P55851 309 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FXYD3Q14802 87 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 RIPPLY2Q5TAB7 128 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 NPCDR1Q9BY65 106 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 ZNF716A6NP11 495 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 C17orf98A8MV24 154 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 HPRT1P00492 218 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms