RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CLN8Q9UBY8 286 aa16.32■□□□□ 0.2
CAPN1-226ENST00000533820 IGKV3D-15A0A087WSY6 115 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 CCL25O15444 150 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 RBMXL2O75526 392 aaKnown RBP16.31■□□□□ 0.2
CAPN1-226ENST00000533820 SLC38A11Q08AI6 406 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 MDP1Q86V88 176 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 DRAM1Q8N682 238 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 TMEM251Q8N6I4 163 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 DEFB127Q9H1M4 99 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
CAPN1-226ENST00000533820 RNF24Q9Y225 148 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 ZNF705FA8MVS1 300 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-226ENST00000533820 GCGP01275 180 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 ZNF705DP0CH99 300 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-226ENST00000533820 ZNF705BP0CI00 300 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-226ENST00000533820 HBG1P69891 147 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 HBG2P69892 147 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 WDR86Q86TI4 376 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 FGFRL1Q8N441 504 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 PLPPR2Q96GM1 343 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 SDF2L1Q9HCN8 221 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 B4GALT7Q9UBV7 327 aa16.31■□□□□ 0.2
CAPN1-226ENST00000533820 RPP25LQ8N5L8 163 aaKnown RBP16.3■□□□□ 0.2
CAPN1-226ENST00000533820 OR1P1Q8NH06 330 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 RNASEH2CQ8TDP1 164 aaKnown RBP16.3■□□□□ 0.2
CAPN1-226ENST00000533820 TMEM9BQ9NQ34 198 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 POLR3KQ9Y2Y1 108 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-226ENST00000533820 XKRY2A2RUG3 117 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 RAB7AP51149 207 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 SRSF7Q16629 238 aaKnown RBP eCLIP16.3■□□□□ 0.2
CAPN1-226ENST00000533820 OR51I2Q9H344 312 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 AURKAIP1Q9NWT8 199 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-226ENST00000533820 CIDEAO60543 219 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 ARR3P36575 388 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 LRRC75BQ2VPJ9 315 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 Q6P435 159 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 TPRX1Q8N7U7 411 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 OR13D1Q8NGV5 346 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 LINC00470Q9BZP3 86 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 OR2J1Q9GZK6 312 aa16.3■□□□□ 0.2
CAPN1-226ENST00000533820 WDR61Q9GZS3 305 aaKnown RBP16.3■□□□□ 0.2
CAPN1-226ENST00000533820 IDH3GP51553 393 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-226ENST00000533820 P2RY6Q15077 328 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 SCCPDHQ8NBX0 429 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 OR1L1Q8NH94 360 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 TAF15Q92804 592 aaKnown RBP eCLIP16.29■□□□□ 0.2
CAPN1-226ENST00000533820 ZFHX4Q86UP3 3567 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 CHRNB4P30926 498 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 IQCJQ1A5X6 159 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 DPPA3Q6W0C5 159 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 OR4X1Q8NH49 305 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 VAX2Q9UIW0 290 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 LAMP3Q9UQV4 416 aa16.29■□□□□ 0.2
CAPN1-226ENST00000533820 LOC102724200A0A096LPH7 203 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-226ENST00000533820 TRAV1-1A0A0B4J248 108 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 CER1O95813 267 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 IL6RP08887 468 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-226ENST00000533820 COL10A1Q03692 680 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 ZNF826PQ6ZT77 177 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 BOD1L1Q8NFC6 3051 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 OR5B21A6NL26 309 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 M0QZ24 198 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 LTC4SQ16873 150 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 ACSM6Q6P461 480 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 Q6ZVH6 145 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 C16orf82Q7Z2V1 217 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 NUDT10Q8NFP7 164 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 ZDHHC16Q969W1 377 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 WDYHV1Q96HA8 205 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 OR2D2Q9H210 308 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 MPC1Q9Y5U8 109 aa16.28■□□□□ 0.2
CAPN1-226ENST00000533820 WNT9BO14905 357 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 HPRT1P00492 218 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 NRN1LQ496H8 165 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 TMEM41BQ5BJD5 291 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 Q5PR19 223 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 C1orf194Q5T5A4 169 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 LIN7CQ9NUP9 197 aaKnown RBP16.27■□□□□ 0.2
CAPN1-226ENST00000533820 TNRC6AQ8NDV7 1962 aaKnown RBP16.27■□□□□ 0.2
CAPN1-226ENST00000533820 LNP1A1A4G5 178 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 J3QT63 122 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 LAMTOR5O43504 91 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-226ENST00000533820 OR52L2PQ8NGH6 319 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 ZFP30Q9Y2G7 519 aa16.27■□□□□ 0.2
CAPN1-226ENST00000533820 CADP27708 2225 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 IGHV3-43A0A0B4J1X8 118 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 IGHV3-43DP0DP04 118 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 EGR1P18146 543 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 CD33P20138 364 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 RPL30P62888 115 aaKnown RBP16.27■□□□□ 0.19
CAPN1-226ENST00000533820 RNPS1Q15287 305 aaKnown RBP16.27■□□□□ 0.19
CAPN1-226ENST00000533820 MRGPRGQ86SM5 289 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 OR4F5Q8NH21 305 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 RFESDQ8TAC1 157 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 MBD3L1Q8WWY6 194 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 OR4F4Q96R69 305 aa16.27■□□□□ 0.19
CAPN1-226ENST00000533820 DEFB108AA8MXU0 73 aa16.26■□□□□ 0.19
CAPN1-226ENST00000533820 S100A7AQ86SG5 101 aa16.26■□□□□ 0.19
CAPN1-226ENST00000533820 GCNT2Q8N0V5 402 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms