RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PATZ1Q9HBE1 687 aaKnown RBP6.77□□□□□ -1.33
NEDD8-207ENST00000533242 NSG2Q9Y328 171 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 A0A0G2JRQ6 117 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 IGSF23A1L1A6 192 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 FAM24AA6NFZ4 105 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 RNASEK-C17orf49H0YIS7 233 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 M0QZ24 198 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 TIMM23O14925 209 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 TUSC2O75896 110 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 JTBO76095 146 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 CD5P06127 495 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 SFTA3P0C7M3 94 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 PPIAL4GP0DN37 164 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 APLNRP35414 380 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 PAX8Q06710 450 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 SPIN3Q5JUX0 258 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 MBNL2Q5VZF2 373 aaKnown RBP6.76□□□□□ -1.33
NEDD8-207ENST00000533242 Q6ZS49 121 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 C1orf174Q8IYL3 243 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 SELENOHQ8IZQ5 122 aaKnown RBP6.76□□□□□ -1.33
NEDD8-207ENST00000533242 HSD17B11Q8NBQ5 300 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 OR4F5Q8NH21 305 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 LYPD6BQ8NI32 183 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 NEK7Q8TDX7 302 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 A0A1B0GV50 99 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 TRDCB7Z8K6 153 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 ST8SIA3O43173 380 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 ADAM20O43506 726 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 GLAP06280 429 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 OMGP23515 440 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 MPV17P39210 176 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 PMELP40967 661 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 AKR1C3P42330 323 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 FAM53AQ6NSI3 398 aaPredicted RBP6.76□□□□□ -1.33
NEDD8-207ENST00000533242 SAXO1Q8IYX7 474 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 OR5A2Q8NGI9 324 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 PLPPR1Q8TBJ4 325 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 CITED1Q99966 193 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 ABHD14AQ9BUJ0 271 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 PLEKHA2Q9HB19 425 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 OR1A1Q9P1Q5 309 aa6.76□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A10PA6NDY2 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A18PA6NE21 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A16PA6NEW6 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A20PA6NIJ5 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A8PA6NJQ4 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A22PA8MWA6 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A12PA8MX19 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A5PA8MXJ8 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 GPR137BO60478 399 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 NDUFA7O95182 113 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 IGLV2-14P01704 120 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TK1P04183 234 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 H2AFB1P0C5Y9 115 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A15PP0C7V4 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A13PP0C7W8 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A14PP0C7W9 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 FAM90A24PP0C7X0 464 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 SPP1P10451 314 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 P2RY1P47900 373 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 EWSR1Q01844 656 aaKnown RBP eCLIP6.75□□□□□ -1.33
NEDD8-207ENST00000533242 CLINT1Q14677 625 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 MPV17LQ2QL34 196 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 NMSQ5H8A3 153 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 HIST2H2BDQ6DRA6 164 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 MKXQ8IYA7 352 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TAF15Q92804 592 aaKnown RBP eCLIP6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM56Q96MV1 263 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 OR51I2Q9H344 312 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 PRDM13Q9H4Q3 707 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 PARP11Q9NR21 331 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 PCDHB16Q9NRJ7 776 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM106BQ9NUM4 274 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 POMT1Q9Y6A1 747 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM56-RWDD3S4R434 201 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TRRAPQ9Y4A5 3859 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 SSSCA1O60232 199 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 CDS2O95674 445 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TFF1P04155 84 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 IGHV4-38-2P0DP08 117 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 LMO1P25800 156 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 PPP1CCP36873 323 aaKnown RBP6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TNFAIP6P98066 277 aaPredicted RBP6.75□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF616Q08AN1 781 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 KIR3DL3Q8N743 410 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 CCDC71LQ8N9Z2 235 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 SLC25A40Q8TBP6 338 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 KLF14Q8TD94 323 aaPredicted RBP6.75□□□□□ -1.33
NEDD8-207ENST00000533242 KIRREL1Q96J84 757 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 AKR1E2Q96JD6 320 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 GINS3Q9BRX5 216 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 OR2J1Q9GZK6 312 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 UBE2J1Q9Y385 318 aaPredicted RBP6.75□□□□□ -1.33
NEDD8-207ENST00000533242 TMED3Q9Y3Q3 217 aa6.75□□□□□ -1.33
NEDD8-207ENST00000533242 SRRM5B3KS81 715 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 H0YL77 283 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 PGLYRP1O75594 196 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms