RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 WDR54Q9H977 334 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 OR51B2Q9Y5P1 312 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 LOC390937A0A1W2PQ73 354 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 TCRBV5S2A0A599 114 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 FRG2CA6NGY1 282 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 CRPP02741 224 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 NMBP08949 121 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 PSG2P11465 335 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 PRTN3P24158 256 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 CA7P43166 264 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 GLIPR1P48060 266 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 SSPNQ14714 243 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 PMVKQ15126 192 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 C12orf73Q69YU5 71 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 LYPD8Q6UX82 237 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 TMEM92Q6UXU6 159 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 GOLT1AQ6ZVE7 132 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 GVQW1Q8N7I0 195 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 OR4D11Q8NGI4 311 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 TEX37Q96LM6 180 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 GTSF1LQ9H1H1 148 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 MYH7P12883 1935 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 LINC00587B1AMM8 73 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 WNT9BO14905 357 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 ICOSLGO75144 302 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 NAPSAO96009 420 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 PPYP01298 95 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 LOXL3P58215 753 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 TNFRSF9Q07011 255 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 ACSF3Q4G176 576 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF585BQ52M93 769 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 ACER2Q5QJU3 275 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 DNM1P46Q6ZS02 220 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 OR11H7Q8NGC8 314 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 MRGPRFQ96AM1 343 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 HARBI1Q96MB7 349 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 C18orf15Q96N68 181 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 ABHD1Q96SE0 405 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 SYT11Q9BT88 431 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 A0A087WUJ7 227 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 IGHV3-20A0A0C4DH32 117 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 H0YL77 283 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 J3QR06 171 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 NPPBP16860 134 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 TSPOP30536 169 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 SEC11AP67812 179 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 CD300CQ08708 224 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 KRTCAP3Q53RY4 240 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 CISD1Q9NZ45 108 aaKnown RBP6.3□□□□□ -1.4
CTNND1-216ENST00000527467 PRR13Q9NZ81 148 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 ARID1BQ8NFD5 2236 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-216ENST00000527467 MYH7BA7E2Y1 1941 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 NDUFC2O95298 119 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 SPINK8P0C7L1 97 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 FGF5P12034 268 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 GZMHP20718 246 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 PLNP26678 52 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 CDAP32320 146 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 PFN3P60673 137 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 FXYD3Q14802 87 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 MS4A6EQ96DS6 147 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 ALKBH3Q96Q83 286 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-216ENST00000527467 SPANXDQ9BXN6 97 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 NUMA1Q14980 2115 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 PPIAL4EA0A075B759 164 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 IGHV3-15A0A0B4J1V0 119 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 ZFPL1O95159 310 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 ISG15P05161 165 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 PPIAL4FP0DN26 164 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 TMEM50BP56557 158 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 PSG9Q00887 426 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 ANKRD34AQ69YU3 496 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 LYZL2Q7Z4W2 148 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 NFAM1Q8NET5 270 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-216ENST00000527467 RHNO1Q9BSD3 238 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 HEXA-AS1Q9H8Q6 139 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 CCL28Q9NRJ3 127 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 SPANXCQ9NY87 97 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 PPIAL4AQ9Y536 164 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-216ENST00000527467 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 FAM74A4Q5TZK3 123 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 OR2H1Q9GZK4 316 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 LPAR2Q9HBW0 351 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 LAMA4Q16363 1823 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 SYNGR1O43759 233 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 ESDP10768 282 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 HSPE1P61604 102 aaKnown RBP6.29□□□□□ -1.4
CTNND1-216ENST00000527467 SCD5Q86SK9 330 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 SPSB4Q96A44 273 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 NABP2Q9BQ15 211 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 CXXC4Q9H2H0 198 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 MPC1Q9Y5U8 109 aa6.29□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF646O15015 1829 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-216ENST00000527467 A0A1W2PRD5 423 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms