RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 RENP00797 406 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 HLA-DQA1P01909 254 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 OR9G9P0C7N8 305 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 SLC25A6P12236 298 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 ZNF20P17024 532 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 VDAC1P21796 283 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 FBLP22087 321 aaKnown RBP4.92□□□□□ -1.62
CD44-225ENST00000527326 GATA2P23769 480 aaPredicted RBP4.92□□□□□ -1.62
CD44-225ENST00000527326 PTGER1P34995 402 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 PGFP49763 221 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 FABP6P51161 128 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 LGALS4P56470 323 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 YPEL5P62699 121 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 EFEMP1Q12805 493 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 TAF10Q12962 218 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 KLRD1Q13241 179 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 EIF3IQ13347 325 aaKnown RBP4.92□□□□□ -1.62
CD44-225ENST00000527326 ZNF726P1Q15940 193 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-225ENST00000527326 ITPRIPL2Q3MIP1 535 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 MRPL2Q5T653 305 aaKnown RBP4.92□□□□□ -1.62
CD44-225ENST00000527326 FKBP1CQ5VVH2 108 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 ATOH7Q8N100 152 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 ZBTB34Q8NCN2 500 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 ZNF439Q8NDP4 499 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 OR2M3Q8NG83 312 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 OR5D14Q8NGL3 314 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 OR10D3Q8NH80 312 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 OTOSQ8NHW6 89 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 TSKUQ8WUA8 353 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 ZNF480Q8WV37 535 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 PP6455Q8WZ26 134 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 RERGQ96A58 199 aaPredicted RBP4.92□□□□□ -1.62
CD44-225ENST00000527326 PTH2Q96A98 100 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 PERPQ96FX8 193 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 SLC35A4Q96G79 324 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 SPATA33Q96N06 139 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 OR2A5Q96R48 311 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 JMJD8Q96S16 334 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 SDF2Q99470 211 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 TIMM29Q9BSF4 260 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 TMEM70Q9BUB7 260 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 GGTLC1Q9BX51 225 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 PECRQ9BY49 303 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 OR2D2Q9H210 308 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 TXNIPQ9H3M7 391 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 SPANXB1Q9NS25 103 aaPredicted RBP4.92□□□□□ -1.62
CD44-225ENST00000527326 MTCH1Q9NZJ7 389 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 C5AR2Q9P296 337 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 KLHL13Q9P2N7 655 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 NAT8BQ9UHF3 227 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 PLAGL1Q9UM63 463 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 R4GMQ9 66 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 PLXNA2O75051 1894 aa4.92□□□□□ -1.62
CD44-225ENST00000527326 CEP290O15078 2479 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 PTPRDP23468 1912 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 DENND4CQ5VZ89 1909 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 A0A1B0GWA3 101 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 MYADML2A6NDP7 307 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 OR4C46A6NHA9 309 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 ZNF878C9JN71 531 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 F2Z2F3 143 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 KIR2DS3K7RE56 304 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 ISLRO14498 428 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 NKX2-8O15522 239 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 CRXO43186 299 aaPredicted RBP4.91□□□□□ -1.62
CD44-225ENST00000527326 SNAI2O43623 268 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 SSSCA1O60232 199 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 C1orf105O95561 183 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 LGALS2P05162 132 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 IGFBP2P18065 325 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 PEBP1P30086 187 aaKnown RBP4.91□□□□□ -1.62
CD44-225ENST00000527326 DRD3P35462 400 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 PTGDSP41222 190 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 CA7P43166 264 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 KIR2DL2P43627 348 aaPredicted RBP4.91□□□□□ -1.62
CD44-225ENST00000527326 OR1D4P47884 311 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 ATP5J2P56134 94 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 OR1D5P58170 312 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 RPS4XP62701 263 aaKnown RBP4.91□□□□□ -1.62
CD44-225ENST00000527326 TGFBR3Q03167 851 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 KIR2DS3Q14952 304 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 POU2AF1Q16633 256 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 RPEL1Q2QD12 228 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 KIAA1644Q3SXP7 199 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 Q56UQ5 140 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 TIMM23BQ5SRD1 257 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 DCAF12Q5T6F0 453 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 MFSD12Q6NUT3 480 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 ACSM6Q6P461 480 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 CBLN3Q6UW01 205 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 ADAMTSL5Q6ZMM2 481 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 TPRG1Q6ZUI0 275 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 LYZL2Q7Z4W2 148 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 HAPLN4Q86UW8 402 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 BPIFA4PQ86YQ2 179 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 GCSAMQ8N6F7 178 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 ZPLD1Q8TCW7 415 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 ZNF721Q8TF20 911 aa4.91□□□□□ -1.62
CD44-225ENST00000527326 C16orf70Q9BSU1 422 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms