RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 G3V3Y1 287 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 H0Y980 276 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 TRAPPC2LH3BP13 241 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 DEGS1O15121 323 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 CIDEAO60543 219 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 PITX3O75364 302 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 MED6O75586 246 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 DFFBO76075 338 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 OR7C1O76099 320 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 IFNA4P05014 189 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 OR5AC1P0C628 307 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 PATE4P0C8F1 98 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 B4GALT1P15291 398 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 ADCYAP1P18509 176 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 VDAC1P21796 283 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 AADACP22760 399 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 CD82P27701 267 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 OPRM1P35372 400 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 MAS1LP35410 378 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 SNCAP37840 140 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 RFC3P40938 356 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 CD200P41217 278 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 NKX2-1P43699 371 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 GNG3P63215 75 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 PRDX4Q13162 271 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 MSMO1Q15800 293 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 HFEQ30201 348 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 PIGYQ3MUY2 71 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 DCAF10Q5QP82 559 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 OR2A2Q6IF42 318 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 ATRAIDQ6UW56 229 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 RBMS3Q6XE24 437 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 Q6ZRG5 221 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 SLC25A26Q70HW3 274 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 MRPL21Q7Z2W9 205 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 NUFIP2Q7Z417 695 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 ZNF573Q86YE8 665 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 CALHM1Q8IU99 346 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 CMTM1Q8IZ96 169 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 SELENOHQ8IZQ5 122 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 GAPTQ8N292 157 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 TMEM251Q8N6I4 163 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 ZNF611Q8N823 705 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 ZNF565Q8N9K5 539 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 ZFP62Q8NB50 900 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 OR56B2PQ8NGI1 322 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 OR5D13Q8NGL4 314 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 FGFBP3Q8TAT2 258 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 MAFIPQ8WZ33 124 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 OR5P3Q8WZ94 311 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 LSM10Q969L4 123 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 TOMM40LQ969M1 308 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 APH1AQ96BI3 265 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 GNPNAT1Q96EK6 184 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 POM121L2Q96KW2 1035 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 ALKBH3Q96Q83 286 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 HDHD3Q9BSH5 251 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 PBDC1Q9BVG4 233 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 PAPOLGQ9BWT3 736 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 PARD6GQ9BYG4 376 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 TTTY12Q9BZ98 90 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 TOLLIPQ9H0E2 274 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 TMEM222Q9H0R3 208 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 TLNRD1Q9H1K6 362 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 LIME1Q9H400 295 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 ZNF442Q9H7R0 627 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 PLEKHF2Q9H8W4 249 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 OR2S2Q9NQN1 319 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 BIN3Q9NQY0 253 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 SMCO4Q9NRQ5 59 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 SLC7A10Q9NS82 523 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 LYRM2Q9NU23 88 aaPredicted RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 CACFD1Q9UGQ2 172 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 RNF150Q9ULK6 438 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 PRELID1Q9Y255 219 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 RCL1Q9Y2P8 373 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 ZNF175Q9Y473 711 aa3.09□□□□□ -1.91
CAST-242ENST00000515063 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
CAST-242ENST00000515063 SDK2Q58EX2 2172 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 MED12Q93074 2177 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 A0A1B0GU03 582 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 PINLYPA6NC86 204 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 SLC22A20A6NK97 555 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 FAM74A7A6NL05 159 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TMEM210A6NLX4 147 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.08□□□□□ -1.92
CAST-242ENST00000515063 J3QT63 122 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 K7N7A8 449 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 PHF1O43189 567 aaPredicted RBP3.08□□□□□ -1.92
CAST-242ENST00000515063 NME2P1O60361 137 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 GOSR1O95249 250 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 IGLV1-44P01699 117 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 HBE1P02100 147 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 OR8U8P0C7N1 319 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 MUC1P15941 1255 aaPredicted RBP3.08□□□□□ -1.92
CAST-242ENST00000515063 SELEP16581 610 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 BCL3P20749 454 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 F2RP25116 425 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 GNRHRP30968 328 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms