RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 TMEM33P57088 247 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 TAS2R45P59539 299 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 RPS24P62847 133 aaKnown RBP1.27□□□□□ -2.21
CHD1-207ENST00000511628 HLA-DRB3P79483 266 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 LGALS9BQ3B8N2 356 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 TMEM176BQ3YBM2 270 aaPredicted RBP1.27□□□□□ -2.21
CHD1-207ENST00000511628 CST9Q5W186 159 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 DAND5Q8N907 189 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 Q8NDZ9 215 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 OR11H2Q8NH07 326 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 OR4K13Q8NH42 304 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 RPS4Y2Q8TD47 263 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 TMBIM1Q969X1 311 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 DHRS9Q9BPW9 319 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 TMEM109Q9BVC6 243 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 DRC3Q9H069 523 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 MAP1LC3AQ9H492 121 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 SPANXB1Q9NS25 103 aaPredicted RBP1.27□□□□□ -2.21
CHD1-207ENST00000511628 ZNHIT6Q9NWK9 470 aaKnown RBP1.27□□□□□ -2.21
CHD1-207ENST00000511628 TXNL4BQ9NX01 149 aaKnown RBP1.27□□□□□ -2.21
CHD1-207ENST00000511628 EMC3Q9P0I2 261 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 MPDZO75970 2070 aa1.27□□□□□ -2.21
CHD1-207ENST00000511628 SLX4Q8IY92 1834 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 COL4A2P08572 1712 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 IGHV3-15A0A0B4J1V0 119 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 MUC21A0A0G2JKD1 596 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 MUC21A0A140T8X8 626 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 KNCNA6PVL3 124 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 H0Y980 276 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 M0QZ92 97 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 PFDN6O15212 129 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 C8orf88P0DMB2 117 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 GZMBP10144 247 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 ATP6V0CP27449 155 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 MAGEA2P43356 314 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 SNAP25P60880 206 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 SLC36A2Q495M3 483 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 AMTNQ6UX39 209 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 ZNF767PQ75MW2 155 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 COMMD7Q86VX2 200 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 CNEP1R1Q8N9A8 125 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 TMEM161BQ8NDZ6 487 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 FGF13Q92913 245 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 PECRQ9BY49 303 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 NKX6-2Q9C056 277 aaPredicted RBP1.26□□□□□ -2.21
CHD1-207ENST00000511628 PSORS1C2Q9UIG4 136 aa1.26□□□□□ -2.21
CHD1-207ENST00000511628 NOSIPQ9Y314 301 aaKnown RBP1.26□□□□□ -2.21
CHD1-207ENST00000511628 NYNRINQ9P2P1 1898 aaKnown RBP1.26□□□□□ -2.21
CHD1-207ENST00000511628 SCN9AQ15858 1988 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 PLXNA3P51805 1871 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 A0A0G2JQZ4 141 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 C5orf49A4QMS7 147 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 C11orf86A6NJI1 115 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 EVPLLA8MZ36 301 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 C21orf140B9A014 251 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 FNDC10F2Z333 226 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 H3BPC8 53 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 CXCR6O00574 342 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 DEXIO95424 95 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 MT-CO2P00403 227 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 IGHV1-69P01742 117 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.25□□□□□ -2.21
CHD1-207ENST00000511628 C1orf194Q5T5A4 169 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 GPHB5Q86YW7 130 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 Q8N402 240 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 OR2D3Q8NGH3 330 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.25□□□□□ -2.21
CHD1-207ENST00000511628 CPNE2Q96FN4 548 aaPredicted RBP1.25□□□□□ -2.21
CHD1-207ENST00000511628 SFRP2Q96HF1 295 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 MND1Q9BWT6 205 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 ZNF471Q9BX82 626 aaPredicted RBP1.25□□□□□ -2.21
CHD1-207ENST00000511628 TTTY12Q9BZ98 90 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 NKIRAS1Q9NYS0 192 aa1.25□□□□□ -2.21
CHD1-207ENST00000511628 KIF15Q9NS87 1388 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 WDR90Q96KV7 1748 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 OR6C6A6NF89 314 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 GNRH2O43555 120 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 SSNA1O43805 119 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 HLA-DQB2P05538 268 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 ZNF728P0DKX0 622 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 ALOX5APP20292 161 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 CCL1P22362 96 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 RPS12P25398 132 aaKnown RBP1.24□□□□□ -2.21
CHD1-207ENST00000511628 RPL12P30050 165 aaKnown RBP1.24□□□□□ -2.21
CHD1-207ENST00000511628 DEFB103AP81534 67 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 EBPQ15125 230 aaKnown RBP1.24□□□□□ -2.21
CHD1-207ENST00000511628 TPRXLQ17RH7 258 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 PCOTHQ58A44 107 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 TNFAIP8L2Q6P589 184 aaPredicted RBP1.24□□□□□ -2.21
CHD1-207ENST00000511628 CCDC121Q6ZUS5 278 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 MS4A6EQ96DS6 147 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 ANKRD36BP1Q96IX9 119 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 DNAJC30Q96LL9 226 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 PARD6GQ9BYG4 376 aaPredicted RBP1.24□□□□□ -2.21
CHD1-207ENST00000511628 TTTY13Q9BZ97 58 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 BABAM2Q9NXR7 383 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 DKKL1Q9UK85 242 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 COQ4Q9Y3A0 265 aa1.24□□□□□ -2.21
CHD1-207ENST00000511628 POLR3HQ9Y535 204 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms