RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TRPM6Q9BX84 2022 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 TMED7-TICAM2A0A0A6YYA0 188 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 TEX50A0A1B0GTY4 177 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 UBFD1O14562 309 aaKnown RBP1.27□□□□□ -2.21
LSM6-205ENST00000507449 CETN3O15182 167 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 GNRH2O43555 120 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 PSMG1O95456 288 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 YEATS4O95619 227 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 IGHV1-69P01742 117 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 HLA-DRAP01903 254 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 IL6P05231 212 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 ZNF728P0DKX0 622 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 ALOX5APP20292 161 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 TMEM33P57088 247 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 CXCR4P61073 352 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 JOSD1Q15040 202 aaPredicted RBP1.27□□□□□ -2.21
LSM6-205ENST00000507449 SAPCD1Q5SSQ6 148 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 BAP18Q8IXM2 172 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 LRRC34Q8IZ02 419 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 DAND5Q8N907 189 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 RPS4Y2Q8TD47 263 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 FGF13Q92913 245 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 CPNE2Q96FN4 548 aaPredicted RBP1.27□□□□□ -2.21
LSM6-205ENST00000507449 KCTD7Q96MP8 289 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 OR52B2Q96RD2 323 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 AMMECR1Q9Y4X0 333 aaPredicted RBP1.27□□□□□ -2.21
LSM6-205ENST00000507449 FAM215AQ9Y5M1 114 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 OTOFQ9HC10 1997 aa1.27□□□□□ -2.21
LSM6-205ENST00000507449 GRIFINA4D1Z8 144 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 H3BRN7 92 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 IGKV1-16P04430 117 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 COX5BP10606 129 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 CTBP2P56545 445 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 MAP3K7CLP57077 242 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 HLA-DRB3P79483 266 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 GLT6D1Q7Z4J2 308 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 NAA40Q86UY6 237 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 CLDND2Q8NHS1 167 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 EEF1AKMT1Q8WVE0 214 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 CMTM5Q96DZ9 223 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 SLC35G5Q96KT7 338 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 TMEM109Q9BVC6 243 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 SPANXB1Q9NS25 103 aaPredicted RBP1.26□□□□□ -2.21
LSM6-205ENST00000507449 PRO2289Q9P1D8 64 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 PSMD13Q9UNM6 376 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 C15orf41Q9Y2V0 281 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 KLK5Q9Y337 293 aaPredicted RBP1.26□□□□□ -2.21
LSM6-205ENST00000507449 ATP6V1DQ9Y5K8 247 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 THSD7AQ9UPZ6 1657 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 ICE1Q9Y2F5 2266 aa1.26□□□□□ -2.21
LSM6-205ENST00000507449 OR6C6A6NF89 314 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 TMEM235A6NFC5 223 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 MT-CO2P00403 227 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 REG1AP05451 166 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 XCL1P47992 114 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 MED21Q13503 144 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 PPP1R1AQ13522 171 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 EBPQ15125 230 aaKnown RBP1.25□□□□□ -2.21
LSM6-205ENST00000507449 AGTRAPQ6RW13 159 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 FAM151BQ6UXP7 276 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 GPHB5Q86YW7 130 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 FAM9CQ8IZT9 166 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 SLC35F6Q8N357 371 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 Q8N402 240 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 HAVCR2Q8TDQ0 301 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 MS4A6EQ96DS6 147 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 SFRP2Q96HF1 295 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 DHRS9Q9BPW9 319 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 HDHD2Q9H0R4 259 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 MYO9BQ13459 2157 aa1.25□□□□□ -2.21
LSM6-205ENST00000507449 EIF4G1Q04637 1599 aaKnown RBP1.25□□□□□ -2.21
LSM6-205ENST00000507449 ZNF638Q14966 1978 aaKnown RBP1.25□□□□□ -2.21
LSM6-205ENST00000507449 COL11A1P12107 1806 aaPredicted RBP1.24□□□□□ -2.21
LSM6-205ENST00000507449 A0A1W2PQD3 144 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 C5orf49A4QMS7 147 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 NDUFB2O95178 105 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 TYMSP04818 313 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 PEBP1P30086 187 aaKnown RBP1.24□□□□□ -2.21
LSM6-205ENST00000507449 RBM11P57052 281 aaKnown RBP1.24□□□□□ -2.21
LSM6-205ENST00000507449 TAS2R30P59541 319 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 MLLT11Q13015 90 aaPredicted RBP1.24□□□□□ -2.21
LSM6-205ENST00000507449 OTUD6BQ8N6M0 293 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 ZNF283Q8N7M2 679 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 TMEM161BQ8NDZ6 487 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 SPACA4Q8TDM5 124 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 SMCR5Q8TEV8 140 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 MAP1LC3AQ9H492 121 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 HES4Q9HCC6 221 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 POLR3HQ9Y535 204 aaPredicted RBP1.24□□□□□ -2.21
LSM6-205ENST00000507449 PXDNLA1KZ92 1463 aa1.24□□□□□ -2.21
LSM6-205ENST00000507449 ABCC12Q96J65 1359 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 A0A087WUU8 490 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 A0A0A6YYH2 397 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 A6NJ64 397 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 C9JCJ5 164 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 UBE2L6O14933 153 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 HLA-DQB2P05538 268 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 TPM3P06753 285 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 C8orf88P0DMB2 117 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 CD24P25063 80 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms