RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZG16O60844 167 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 NXPH3O95157 252 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 SNAPINO95295 136 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 RPP30P78346 268 aaKnown RBP14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 DEFA5Q01523 94 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 TLE4Q04727 773 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 PDLIM3Q53GG5 364 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 PLPPR2Q96GM1 343 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 TMEM106BQ9NUM4 274 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 KIAA2026Q5HYC2 2103 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 PPIHO43447 177 aaKnown RBP14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 SCO1O75880 301 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 IAPPP10997 89 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 NQO2P16083 231 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 SERF2P84101 59 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 LTC4SQ16873 150 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 IZUMO4Q1ZYL8 232 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 FAM201AQ5SY85 155 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 ZGRF1Q86YA3 2104 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 DMRTC2Q8IXT2 367 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 LILRB2Q8N423 598 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 NKX6-2Q9C056 277 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 KAAG1Q9UBP8 84 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 TIMM9Q9Y5J7 89 aa14.29□□□□□ -0.12
TRAPPC11-204ENST00000505676 E7EQL1 145 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 DAOP14920 347 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 NCR3LG1Q68D85 454 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 ZNF525Q8N782 197 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 FAM213BQ8TBF2 198 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 CLCC1Q96S66 551 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 AIFM2Q9BRQ8 373 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 SLC25A10Q9UBX3 287 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 RPUSD1Q9UJJ7 312 aaKnown RBP14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 KPTNQ9Y664 436 aa14.28□□□□□ -0.12
TRAPPC11-204ENST00000505676 CCL21O00585 134 aa14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 TAGLNQ01995 201 aaKnown RBP14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 TMEM267Q0VDI3 215 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 OR2B11Q5JQS5 317 aa14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 PUSL1Q8N0Z8 303 aaKnown RBP14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 KDF1Q8NAX2 398 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 ZNF439Q8NDP4 499 aa14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 DEFB108BQ8NET1 73 aa14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 DTD1Q8TEA8 209 aa14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 DDB2Q92466 427 aa14.27□□□□□ -0.12
TRAPPC11-204ENST00000505676 FCGR3BO75015 233 aa14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 LRRC75BQ2VPJ9 315 aa14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 LRRC10Q5BKY1 277 aa14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 SPANXN5Q5MJ07 72 aa14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 DHRS7BQ6IAN0 325 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 FAM53AQ6NSI3 398 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 FAM216BQ8N7L0 139 aa14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 RBMXL1Q96E39 390 aaKnown RBP14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 AKAP13Q12802 2813 aa14.27□□□□□ -0.13
TRAPPC11-204ENST00000505676 CELSR3Q9NYQ7 3312 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 H3BP45 60 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 TMPRSS2O15393 492 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 SOX15O60248 233 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 METTL15P1P0C7V9 234 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 SPCS3P61009 180 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 TCF23Q7RTU1 214 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 C8orf31Q8N9H6 132 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 ARID1AO14497 2285 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 CADP27708 2225 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 TRAV1-1A0A0B4J248 108 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 TNFRSF13BO14836 293 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 NDUFB3O43676 98 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 PROP1O75360 226 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 SELLP14151 372 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 SLC38A11Q08AI6 406 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 GUK1Q16774 197 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 CT45A1Q5HYN5 189 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 SLC25A48Q6ZT89 311 aaKnown RBP14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 ZNF429Q86V71 674 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 CT45A3Q8NHU0 189 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 TMEM147Q9BVK8 224 aa14.26□□□□□ -0.13
TRAPPC11-204ENST00000505676 LOC400499M0QZD8 3231 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 RBMXL2O75526 392 aaKnown RBP14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 H2AFB1P0C5Y9 115 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 NDUFB7P17568 137 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 ZNF134P52741 427 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 MRPS11P82912 194 aaKnown RBP14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 BTN1A1Q13410 526 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 POU2AF1Q16633 256 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 PRAMEF5Q5TYX0 476 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 FAM71F2Q6NXP2 309 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 OR10P1Q8NGE3 313 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 OR4A16Q8NH70 328 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 KIAA1456Q9P272 454 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 PTPRQQ9UMZ3 2332 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 SFTA3P0C7M3 94 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 ADCYAP1P18509 176 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 GNB2P62879 340 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 RPL31P62899 125 aaKnown RBP14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 WDR61Q9GZS3 305 aaKnown RBP14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 UNKLQ9H9P5 680 aaKnown RBP14.25□□□□□ -0.13
TRAPPC11-204ENST00000505676 DYSFO75923 2080 aa14.24□□□□□ -0.13
TRAPPC11-204ENST00000505676 CEBPZOSA8MTT3 80 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms