RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 VDAC2P45880 294 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 PRRX1P54821 245 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 BLCAPP62952 87 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 C17orf58Q2M2W7 97 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 NSUN5P1Q3KNT7 163 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 LYG1Q8N1E2 194 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 OR10A7Q8NGE5 316 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 MRGPRFQ96AM1 343 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 AKR1E2Q96JD6 320 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 OR1A1Q9P1Q5 309 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 OR5H14A6NHG9 310 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 INMT-MINDY4F8WBC2 141 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 ARPC1BO15143 372 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 H2AFB2P0C5Z0 115 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 CD28P10747 220 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 AADACP22760 399 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 NFYAP23511 347 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 CD24P25063 80 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 MECP2P51608 486 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 OR52M1Q8NGK5 317 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 OR2W1Q9Y3N9 320 aa14.41□□□□□ -0.1
SQSTM1-209ENST00000504627 TRAV6A0A075B6T7 132 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 IGLV1-47P01700 117 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 OPN1MWP04001 364 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 OPN1MW2P0DN77 364 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 OPN1MW3P0DN78 364 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 CD34P28906 385 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 UCP3P55916 312 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 HLA-DRB5Q30154 266 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 C5orf24Q7Z6I8 188 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 UBALD1Q8TB05 177 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 OR2S2Q9NQN1 319 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 RDH8Q9NYR8 311 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 IDI2-AS1Q9NZ38 188 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 VSIG4Q9Y279 399 aa14.4□□□□□ -0.1
SQSTM1-209ENST00000504627 TGP01266 2768 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 BUB1B-PAK6H3BSN5 160 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 PRAF2O60831 178 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 RGS11O94810 467 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 DHFRP00374 187 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 PGAM2P15259 253 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 TAS2R31P59538 309 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 LY6G6FQ5SQ64 297 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 Q6ZS46 218 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 C16orf82Q7Z2V1 217 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 SLC38A6Q8IZM9 456 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 MARCH1Q8TCQ1 289 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 EDARADDQ8WWZ3 215 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 GFOD1Q9NXC2 390 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 GNG12Q9UBI6 72 aa14.39□□□□□ -0.11
SQSTM1-209ENST00000504627 ITGB1BP1O14713 200 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 YPEL1O60688 119 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 RLN1P04808 185 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 CTSDP07339 412 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 LOXL3P58215 753 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 FXYD4P59646 89 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 UBE2MP61081 183 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 GNMTQ14749 295 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 TMEM95Q3KNT9 176 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 Q3ZCU0 254 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 TPTE2P1Q5T6R2 138 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 CCDC144NLQ6NUI1 221 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 OR52L2PQ8NGH6 319 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 OR9G1Q8NH87 305 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 RFESDQ8TAC1 157 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 ZFAND1Q8TCF1 268 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 TOMM40LQ969M1 308 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 R3HDM4Q96D70 268 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 ZNF486Q96H40 463 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 YPEL2Q96QA6 119 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 SLC25A33Q9BSK2 321 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 WNT10AQ9GZT5 417 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 GPR132Q9UNW8 380 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 FLVCR2Q9UPI3 526 aa14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 C14orf166Q9Y224 244 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-209ENST00000504627 A0A087X0M5 115 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 A0A1B0GX30 115 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 G3V4G9 280 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 CEACAM6P40199 344 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 LUMP51884 338 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 LTC4SQ16873 150 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 TATDN3Q17R31 274 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 LPCAT3Q6P1A2 487 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 NDUFA11Q86Y39 141 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 OR4F17Q8NGA8 305 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 OR10V1Q8NGI7 309 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 RPEQ96AT9 228 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 OR4F4Q96R69 305 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 CITED2Q99967 270 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 ALX4Q9H161 411 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 C5orf66Q9H5L9 145 aa14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 AMMECR1Q9Y4X0 333 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-209ENST00000504627 C7orf66A4D0T2 115 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 OOSP1A8MZH6 123 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 OR2F2O95006 317 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 IGHV3-7P01780 117 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 IL5P05113 134 aa14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 ANXA7P20073 488 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 PPP1CCP36873 323 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-209ENST00000504627 MSMO1Q15800 293 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms