RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 A0A1W2PRD5 423 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 A0A1W2PRF3 423 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 A0A1W2PRM7 423 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 AVPP01185 164 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 IFNA2P01563 188 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 HLA-AP01891 365 aaKnown RBP10.96□□□□□ -0.65
APTX-231ENST00000494973 SERPINE2P07093 398 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 OR4E1P0C645 316 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 PI3P19957 117 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 VAMP1P23763 118 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 CD1BP29016 333 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 DYNLT3P51808 116 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
APTX-231ENST00000494973 HABP2Q14520 560 aaPredicted RBP10.96□□□□□ -0.65
APTX-231ENST00000494973 SSX2Q16385 188 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 LYG2Q86SG7 212 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 MOB3BQ86TA1 216 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 OR51H1Q8NH63 302 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 COQ8AQ8NI60 647 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 NABP2Q9BQ15 211 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 MRPL20Q9BYC9 149 aaKnown RBP10.96□□□□□ -0.65
APTX-231ENST00000494973 MEGF9Q9H1U4 602 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 CSMD1Q96PZ7 3565 aa10.96□□□□□ -0.65
APTX-231ENST00000494973 OTOGQ6ZRI0 2925 aa10.96□□□□□ -0.66
APTX-231ENST00000494973 SETXQ7Z333 2677 aaKnown RBP10.95□□□□□ -0.66
APTX-231ENST00000494973 AKAP9Q99996 3911 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 A0A1W2PPI3 338 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 VGLL3A8MV65 326 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 SNRPGP15A8MWD9 76 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 TNFSF12O43508 249 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 CREBL2O60519 120 aaPredicted RBP10.95□□□□□ -0.66
APTX-231ENST00000494973 SFT2D2O95562 160 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 LY6G6DO95868 133 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 FAM106CPP0CH98 169 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 ANXA7P20073 488 aaKnown RBP10.95□□□□□ -0.66
APTX-231ENST00000494973 RAB25P57735 213 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 PRB3Q04118 309 aaPredicted RBP10.95□□□□□ -0.66
APTX-231ENST00000494973 RUSC1-AS1Q66K80 236 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 BRD3OSQ6XYD6 125 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
APTX-231ENST00000494973 C1orf229Q6ZS94 237 aaPredicted RBP10.95□□□□□ -0.66
APTX-231ENST00000494973 LHFPL4Q7Z7J7 247 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 OSR1Q8TAX0 266 aaPredicted RBP10.95□□□□□ -0.66
APTX-231ENST00000494973 DDB2Q92466 427 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 IL22RA2Q969J5 263 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 TMEM230Q96A57 120 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 RNF5Q99942 180 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 COMMD9Q9P000 198 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 ZNRD1Q9P1U0 126 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 FLVCR2Q9UPI3 526 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 HILPDAQ9Y5L2 63 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 NAV3Q8IVL0 2385 aa10.95□□□□□ -0.66
APTX-231ENST00000494973 IGHV3OR16-10A0A075B7F0 116 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 A0A0B4J2A0 478 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 BTBD17A6NE02 478 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 H0YJW9 148 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 H7C2Y5 167 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 DUS4LO95620 317 aaKnown RBP10.94□□□□□ -0.66
APTX-231ENST00000494973 HPRT1P00492 218 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 CT45A6P0DMU7 189 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 CT45A5P0DMU8 189 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 CT45A7P0DMV0 189 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 UCP1P25874 307 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 REG1BP48304 166 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 DHRS2Q13268 280 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 PPP1R1AQ13522 171 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 LRRC75BQ2VPJ9 315 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 THNSL2Q86YJ6 484 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 SPAG16Q8N0X2 631 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 LGI3Q8N145 548 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 ADAD2Q8NCV1 583 aaKnown RBP10.94□□□□□ -0.66
APTX-231ENST00000494973 OR4C13Q8NGP0 309 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 ZNF431Q8TF32 576 aaPredicted RBP10.94□□□□□ -0.66
APTX-231ENST00000494973 C5orf30Q96GV9 206 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 PHB2Q99623 299 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 BEX2Q9BXY8 128 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 TMEM222Q9H0R3 208 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 PLEKHA2Q9HB19 425 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 SHPKQ9UHJ6 478 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 PITPNC1Q9UKF7 332 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 ACANP16112 2415 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
APTX-231ENST00000494973 TLN2Q9Y4G6 2542 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 A0A0U1RQK1 487 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 C9orf170A2RU37 121 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 LINC00473A8K010 186 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 TIMM23O14925 209 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 FCGR3BO75015 233 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 PROP1O75360 226 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 SPDEFO95238 335 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 HRASP01112 189 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 OR5AC1P0C628 307 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 LGALS7P47929 136 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 ERVK-16P61578 105 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 TATDN3Q17R31 274 aa10.93□□□□□ -0.66
APTX-231ENST00000494973 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
APTX-231ENST00000494973 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms