RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 RAC3P60763 192 aa8.35□□□□□ -1.07
ERCC3-208ENST00000491292 ERVK-16P61578 105 aa8.35□□□□□ -1.07
ERCC3-208ENST00000491292 MIC13Q5XKP0 118 aa8.35□□□□□ -1.07
ERCC3-208ENST00000491292 FAM53AQ6NSI3 398 aaPredicted RBP8.35□□□□□ -1.07
ERCC3-208ENST00000491292 PLPPR1Q8TBJ4 325 aa8.35□□□□□ -1.07
ERCC3-208ENST00000491292 DLL3Q9NYJ7 618 aa8.35□□□□□ -1.07
ERCC3-208ENST00000491292 FZR1Q9UM11 496 aa8.35□□□□□ -1.07
ERCC3-208ENST00000491292 IGKV1-6A0A0C4DH72 117 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 OR5G3P0C626 314 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 LMO1P25800 156 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 OTX1P32242 354 aaPredicted RBP8.34□□□□□ -1.07
ERCC3-208ENST00000491292 MAS1LP35410 378 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 CDKN1AP38936 164 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 FOLR3P41439 243 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 COTL1Q14019 142 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 KCNMB1Q16558 191 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 Q56UQ5 140 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 C1orf194Q5T5A4 169 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 SLC25A45Q8N413 288 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 CPEB3Q8NE35 698 aaKnown RBP8.34□□□□□ -1.07
ERCC3-208ENST00000491292 NFAM1Q8NET5 270 aaPredicted RBP8.34□□□□□ -1.07
ERCC3-208ENST00000491292 TMEM106BQ9NUM4 274 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 NUP210LQ5VU65 1888 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 HSBP1O75506 76 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 S1PR2O95136 353 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 SRP14P37108 136 aaKnown RBP8.34□□□□□ -1.07
ERCC3-208ENST00000491292 CAMPP49913 170 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 GNG3P63215 75 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 VKORC1L1Q8N0U8 176 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 NHLRC2Q8NBF2 726 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 OR1L1Q8NH94 360 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 ST6GALNAC6Q969X2 333 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 WDYHV1Q96HA8 205 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 RIMS4Q9H426 269 aaPredicted RBP8.34□□□□□ -1.07
ERCC3-208ENST00000491292 SLC35D1Q9NTN3 355 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 TMEM242Q9NWH2 141 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 TMEM250H0YL14 139 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 RAMP3O60896 148 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 LILRA1O75019 489 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 FKBP2P26885 142 aaKnown RBP8.34□□□□□ -1.07
ERCC3-208ENST00000491292 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
ERCC3-208ENST00000491292 AESQ08117 197 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 C10orf128Q5T292 105 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 TUSC5Q8IXB3 177 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 OR5A2Q8NGI9 324 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 MBD3L1Q8WWY6 194 aa8.34□□□□□ -1.07
ERCC3-208ENST00000491292 IGKV1-5P01602 117 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 IGHEP01854 428 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 ARL14EPLP0DKL9 152 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 SFTPCP11686 197 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 FOXG1P55316 489 aaPredicted RBP8.33□□□□□ -1.08
ERCC3-208ENST00000491292 NXPH1P58417 271 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 LPAL2Q16609 132 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 TGIF2LYQ8IUE0 185 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 DRAM1Q8N682 238 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 OR4P4Q8NGL7 312 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 APOBEC3DQ96AK3 386 aaPredicted RBP8.33□□□□□ -1.08
ERCC3-208ENST00000491292 GALMQ96C23 342 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 SFRP2Q96HF1 295 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 PSMG3Q9BT73 122 aaPredicted RBP8.33□□□□□ -1.08
ERCC3-208ENST00000491292 HIPK2Q9H2X6 1198 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 ZNF331Q9NQX6 463 aaPredicted RBP8.33□□□□□ -1.08
ERCC3-208ENST00000491292 DEPPQ9NTK1 212 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 A0A0G2JMM0 328 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 A0A1W2PPB8 328 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 A0A1W2PRS3 328 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 KIR3DP1A8MWS1 328 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 RFPL3SP0C7P2 107 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 CCL4P13236 92 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 RNASEKQ6P5S7 137 aaKnown RBP8.33□□□□□ -1.08
ERCC3-208ENST00000491292 ZIC4Q8N9L1 334 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 TMEM54Q969K7 222 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 LPAR2Q9HBW0 351 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 CHCHD2Q9Y6H1 151 aaPredicted RBP8.33□□□□□ -1.08
ERCC3-208ENST00000491292 TCTAP57738 103 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 RAB31Q13636 194 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 TIGITQ495A1 244 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 ZNF596Q8TC21 504 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 MIEN1Q9BRT3 115 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 PLSCR2Q9NRY7 297 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 CRIM1Q9NZV1 1036 aa8.33□□□□□ -1.08
ERCC3-208ENST00000491292 SH2D1BO14796 132 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 CTSSP25774 331 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 PTGDSP41222 190 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 ARG2P78540 354 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 SPINK14Q6IE38 97 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 CRIP3Q6Q6R5 217 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 DOLPP1Q86YN1 238 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 CLEC1BQ9P126 229 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 RNF115Q9Y4L5 304 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 PKDREJQ9NTG1 2253 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 MT-CO2P00403 227 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 UBE2NP61088 152 aaKnown RBP8.32□□□□□ -1.08
ERCC3-208ENST00000491292 HOXA4Q00056 320 aaPredicted RBP8.32□□□□□ -1.08
ERCC3-208ENST00000491292 ZNF826PQ6ZT77 177 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 HAPLN4Q86UW8 402 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 NPCDR1Q9BY65 106 aa8.32□□□□□ -1.08
ERCC3-208ENST00000491292 DECR2Q9NUI1 292 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms