RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 EIF1P41567 113 aaKnown RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 SRP9P49458 86 aaKnown RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 PSMB3P49720 205 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 GABARAPL2P60520 117 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 PSPHP78330 225 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 LOXL1Q08397 574 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 ELOCQ15369 112 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 MPV17L2Q567V2 206 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 AKR1C8PQ5T2L2 129 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 SAMD13Q5VXD3 122 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 GUSBP11Q6P575 273 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 FA2HQ7L5A8 372 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 WDR86Q86TI4 376 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR2T4Q8NH00 348 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR1L1Q8NH94 360 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 APOBEC3DQ96AK3 386 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 RMI2Q96E14 147 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 UQCC1Q9NVA1 299 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 TAS2R1Q9NYW7 299 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR52A1Q9UKL2 312 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 PCYT1BQ9Y5K3 369 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 ZNF706Q9Y5V0 76 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 PXMP4Q9Y6I8 212 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 VWA8A3KMH1 1905 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 KIF26AQ9ULI4 1882 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 DYSFO75923 2080 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 NUP160Q12769 1436 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 WRNQ14191 1432 aaPredicted RBP eCLIP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 LOC102724200A0A096LPH7 203 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM72A0PK05 275 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGSF23A1L1A6 192 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 MAP1LC3B2A6NCE7 125 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 ZNF850A8MQ14 1090 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM250H0YL14 139 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 SLC17A3O00476 420 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 KPNA4O00629 521 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 ISLRO14498 428 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 CHST10O43529 356 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 MFSD11O43934 449 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGLV2-8P01709 118 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 IL4P05112 153 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 LINC00869P0C866 280 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 ORM2P19652 201 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 PHBP35232 272 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 HSPA9P38646 679 aaKnown RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 ZNF83P51522 516 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 TPI1P60174 286 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 FABP9Q0Z7S8 132 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 SURF2Q15527 256 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM128Q5BJH2 165 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 DCUN1D2Q6PH85 259 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 SBSNQ6UWP8 590 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 C5orf46Q6UWT4 87 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 NTM-AS1Q6ZSK4 140 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 GOLT1AQ6ZVE7 132 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 TCF23Q7RTU1 214 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 PDPNQ86YL7 162 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 ANKRD29Q8N6D5 301 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM75Q8N9X5 138 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR11H6Q8NGC7 330 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR5H2Q8NGV7 314 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 RNASE11Q8TAA1 199 aaKnown RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 LHFPL5Q8TAF8 219 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 CT55Q8WUE5 264 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 GALMQ96C23 342 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 NARS2Q96I59 477 aaKnown RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 C18orf15Q96N68 181 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 CDX2Q99626 313 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 GGTLC1Q9BX51 225 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 MAP1LC3BQ9GZQ8 125 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 RNASE7Q9H1E1 156 aaKnown RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 LYRM2Q9NU23 88 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 GRIN2BQ13224 1484 aa2.7□□□□□ -1.98
HMGB1P38-201ENST00000490557 PRORSD1PA6NEY8 169 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 KNCNA6PVL3 124 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 INMT-MINDY4F8WBC2 141 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 MRASO14807 208 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 GPR75O95800 540 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 APCSP02743 223 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 SERPINE1P05121 402 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 ERP29P30040 261 aaKnown RBP2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 INPP1P49441 399 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 AP1S1P61966 158 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 SNRPD2P62316 118 aaKnown RBP2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 HERVK_113P63121 156 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 IL15RAQ13261 267 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM78Q5T7P6 136 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM205Q6UW68 189 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 TOMM20LQ6UXN7 152 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 SLC16A13Q7RTY0 426 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 FAM24BQ8N5W8 94 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR8B12Q8NGG6 310 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 C15orf40Q8WUR7 153 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 ROPN1LQ96C74 230 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 TMEM70Q9BUB7 260 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 PBDC1Q9BVG4 233 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 GTSF1LQ9H1H1 148 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 PRTFDC1Q9NRG1 225 aa2.69□□□□□ -1.98
HMGB1P38-201ENST00000490557 TAC3Q9UHF0 121 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms