RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 APOC4P55056 127 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 SYNJ2BPP57105 145 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 MADCAM1Q13477 382 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 COTL1Q14019 142 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 Q3ZCU0 254 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 IFI44LQ53G44 452 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 UTF1Q5T230 341 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 TMEM182Q6ZP80 229 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-217ENST00000487825 TRAPPC6BQ86SZ2 158 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 OAFQ86UD1 273 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 BBS1Q8NFJ9 593 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 OR56B1Q8NGI3 324 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 OR2T10Q8NGZ9 312 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 OR9G1Q8NH87 305 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 CASTOR1Q8WTX7 329 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 PIGCQ92535 297 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 SPSB1Q96BD6 273 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 RCN3Q96D15 328 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 GPX7Q96SL4 187 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-217ENST00000487825 COPS4Q9BT78 406 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 RNF126Q9BV68 326 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 POLR2J2Q9GZM3 115 aaKnown RBP3.2□□□□□ -1.9
BRCA1-217ENST00000487825 NSRP1Q9H0G5 558 aaKnown RBP3.2□□□□□ -1.9
BRCA1-217ENST00000487825 POLR2J3Q9H1A7 115 aaKnown RBP3.2□□□□□ -1.9
BRCA1-217ENST00000487825 VIPAS39Q9H9C1 493 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 NUDT15Q9NV35 164 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 MRPL22Q9NWU5 206 aaKnown RBP3.2□□□□□ -1.9
BRCA1-217ENST00000487825 CD300AQ9UGN4 299 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 IGHV3-72A0A0B4J1Y9 119 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 IGHV1-3A0A0C4DH29 117 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 J3QT63 122 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 K7EQM0 130 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 CRYGCP07315 174 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 CLUP10909 449 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 PSKH1P11801 424 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 CD1BP29016 333 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 ERP29P30040 261 aaKnown RBP3.19□□□□□ -1.9
BRCA1-217ENST00000487825 GPR183P32249 361 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 RPS27P42677 84 aaKnown RBP3.19□□□□□ -1.9
BRCA1-217ENST00000487825 CX3CR1P49238 355 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 TAS2R41P59536 307 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
BRCA1-217ENST00000487825 CBX1P83916 185 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF816Q0VGE8 651 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-217ENST00000487825 GRK1Q15835 563 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 CEACAM21Q3KPI0 293 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 TMEM41BQ5BJD5 291 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 PYHIN1Q6K0P9 492 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 DLEU7Q6UYE1 221 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 SLC16A13Q7RTY0 426 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 C5orf24Q7Z6I8 188 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 LINC00471Q8N535 108 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 RNF148Q8N7C7 305 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 TMEM104Q8NE00 496 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 OR52B4Q8NGK2 314 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 BSCL2Q96G97 398 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-217ENST00000487825 MBOAT4Q96T53 435 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 OCR1Q9BZK8 76 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 FAM192AQ9GZU8 254 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 RGCCQ9H4X1 137 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 SPACA1Q9HBV2 294 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 IL1RAPQ9NPH3 570 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 PARP11Q9NR21 331 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 SLC25A37Q9NYZ2 338 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF319Q9P2F9 582 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 PSMC3IPQ9P2W1 217 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-217ENST00000487825 KLK11Q9UBX7 282 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 ENPP5Q9UJA9 477 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 RIMS3Q9UJD0 308 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 COPS3Q9UNS2 423 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 B9D1Q9UPM9 204 aa3.19□□□□□ -1.9
BRCA1-217ENST00000487825 FOXA2Q9Y261 457 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-217ENST00000487825 TRGV10A0A0A0MS01 117 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 IGHV7-81A0A0B4J1V7 117 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 TRAV10A0A0B4J240 114 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 KIR2DL5BA0A0G2JN68 375 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 KIR2DL5BA0A0G2JPC4 375 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 HELTA6NFD8 242 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 EFCAB9A8MZ26 197 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF878C9JN71 531 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 COPEO14579 308 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 CDC42EP2O14613 210 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 HSD17B6O14756 317 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 OR2A4O95047 310 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 TXNDC12O95881 172 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 MOSP00540 346 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 HLA-DRB1P01911 266 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 RPA2P15927 270 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 NCK1P16333 377 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 C4BPBP20851 252 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 BLVRBP30043 206 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-217ENST00000487825 PTGFRP43088 359 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 DLK1P80370 383 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 LIPEQ05469 1076 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 PRKCDQ05655 676 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 GUCA2BQ16661 112 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 DCXRQ7Z4W1 244 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 MOB3BQ86TA1 216 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 MSRB3Q8IXL7 192 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 NRMQ8IXM6 262 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms