RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 SLC17A3O00476 420 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 NAPSAO96009 420 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 BLVRBP30043 206 aaPredicted RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 LGALS4P56470 323 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 GNB1P62873 340 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 SERF2P84101 59 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 ID3Q02535 119 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 RPL18Q07020 188 aaKnown RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 FOXI2Q6ZQN5 318 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF295-AS1Q8N0V1 137 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 LRRC25Q8N386 305 aaPredicted RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 STPG3Q8N7X2 389 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 KLF16Q9BXK1 252 aaPredicted RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 QTRT1Q9BXR0 403 aaKnown RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 WDR54Q9H977 334 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 COPS7AQ9UBW8 275 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 MDFIC2A0A1B0GVS7 189 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 B9A039 149 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 ADAM20O43506 726 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 UQCRFS1P47985 274 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 UBE2G1P62253 170 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF439Q8NDP4 499 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 NUS1Q96E22 293 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 SLC25A22Q9H936 323 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 MYOFQ9NZM1 2061 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 IGKV1-8A0A0C4DH67 115 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 LRP5LA4QPB2 252 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 OR4C46A6NHA9 309 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 IL12BP29460 328 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 SRIP30626 198 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 NNATQ16517 81 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 UEVLDQ8IX04 471 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 TCEAL8Q8IYN2 117 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 SCCPDHQ8NBX0 429 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 OR52N5Q8NH56 324 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 SPSB4Q96A44 273 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 GNB1LQ9BYB4 327 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 HES4Q9HCC6 221 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 NAT8BQ9UHF3 227 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 ANXA10Q9UJ72 324 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 ARL2-SNX15V9GYD0 113 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 FAM186AA6NE01 2351 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 RALGAPA1Q6GYQ0 2036 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 A0A0G2JLM5 398 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 A0A1W2PPV9 198 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 H3BRM9 83 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 K7ESM1 405 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 NDUFB4O95168 129 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 HLA-DRB1P01911 266 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 CRYAAP02489 173 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 FAM87AP0C7U9 286 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 CRYBB3P26998 211 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 GPR183P32249 361 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 ATP5J2P56134 94 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 OR1D5P58170 312 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 ATP5G2Q06055 141 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 MLF2Q15773 248 aaPredicted RBP6.63□□□□□ -1.35
COL4A5-205ENST00000483338 CBLN3Q6UW01 205 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 OR5AS1Q8N127 324 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 GALMQ96C23 342 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 SCRT2Q9NQ03 307 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 IL36BQ9NZH7 164 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 CLCF1Q9UBD9 225 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 ERG28Q9UKR5 140 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 SPCS1Q9Y6A9 102 aa6.63□□□□□ -1.35
COL4A5-205ENST00000483338 PCDH15Q96QU1 1955 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 TRAV9-1A0A075B6T8 112 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 HMGA1P17096 107 aaKnown RBP6.62□□□□□ -1.35
COL4A5-205ENST00000483338 SEC11AP67812 179 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 ARL16Q0P5N6 197 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 ZIC1Q15915 447 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 DMRTC1Q5HYR2 192 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF525Q8N782 197 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 VSTM2AQ8TAG5 236 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 BAHD1Q8TBE0 780 aaPredicted RBP6.62□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF418Q8TF45 676 aaPredicted RBP6.62□□□□□ -1.35
COL4A5-205ENST00000483338 C12orf49Q9H741 205 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 HS3ST2Q9Y278 367 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 OR1A2Q9Y585 309 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 VWC2LB2RUY7 222 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 B5MCH6 92 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 PNMTP11086 282 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 PTGDSP41222 190 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 AESQ08117 197 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 EMC4Q5J8M3 183 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 FHL5Q5TD97 284 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 C6orf201Q7Z4U5 140 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 YAF2Q8IY57 180 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 PRR22Q8IZ63 422 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 OR1F12Q8NHA8 337 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 ABHD14BQ96IU4 210 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 OR2A5Q96R48 311 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 UFC1Q9Y3C8 167 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 TRBV9A0A0B4J1U6 114 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 EPOPA6NHQ4 379 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF850A8MQ14 1090 aa6.62□□□□□ -1.35
COL4A5-205ENST00000483338 BMPR1BO00238 502 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms