RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 C1orf210Q8IVY1 113 aa8.62□□□□□ -1.03
COMMD4-203ENST00000480484 OSR2Q8N2R0 312 aa8.62□□□□□ -1.03
COMMD4-203ENST00000480484 SLC39A9Q9NUM3 307 aa8.62□□□□□ -1.03
COMMD4-203ENST00000480484 RNF150Q9ULK6 438 aa8.62□□□□□ -1.03
COMMD4-203ENST00000480484 IGHV5-10-1A0A0J9YXX1 117 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 VDAC1P21796 283 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 OR10J1P30954 320 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 MDH2P40926 338 aaKnown RBP8.61□□□□□ -1.03
COMMD4-203ENST00000480484 RBPJQ06330 500 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 GJC3Q8NFK1 279 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 OR4F5Q8NH21 305 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 OR51H1Q8NH63 302 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 OR4F4Q96R69 305 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 CDX2Q99626 313 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-203ENST00000480484 CCL28Q9NRJ3 127 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 OCIAD1Q9NX40 245 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 IGKV1-12A0A0C4DH73 117 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 NUPR1O60356 82 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 IGKV1D-12P01611 117 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 CXCL12P48061 93 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TNFSF10P50591 281 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 MEF2BQ02080 365 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TMEM41BQ5BJD5 291 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 ACTL10Q5JWF8 245 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 FAM78BQ5VT40 261 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 CYP2G1PQ6ZSU1 146 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TGIF2LYQ8IUE0 185 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 UBALD1Q8TB05 177 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TMEM56Q96MV1 263 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 P2RX4Q99571 388 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 LPAR2Q9HBW0 351 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 IL36RNQ9UBH0 155 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TMEM56-RWDD3S4R434 201 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 A0A1W2PNV4 684 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 M0QZK8 103 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TP53I11O14683 189 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TOX3O15405 576 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-203ENST00000480484 GGCTO75223 188 aaKnown RBP8.61□□□□□ -1.03
COMMD4-203ENST00000480484 VAMP5O95183 116 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 HNF1AP20823 631 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 MSR1P21757 451 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 PTGDSP41222 190 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 PDLIM4P50479 330 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 HOXA4Q00056 320 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-203ENST00000480484 SLC23A3Q6PIS1 610 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 NEK7Q8TDX7 302 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 GATAD1Q8WUU5 269 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 ZNF385AQ96PM9 386 aaKnown RBP8.61□□□□□ -1.03
COMMD4-203ENST00000480484 FAM110AQ9BQ89 295 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 PYGO2Q9BRQ0 406 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 PARLQ9H300 379 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 CRIM1Q9NZV1 1036 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 TRAPPC1Q9Y5R8 145 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 ADGRG4Q8IZF6 3080 aa8.61□□□□□ -1.03
COMMD4-203ENST00000480484 IGKV1D-13A0A0B4J2D9 117 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 KIR2DL5BA0A0G2JN68 375 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 KIR2DL5BA0A0G2JPC4 375 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 A0A0G2JRQ6 117 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 FBLL1A6NHQ2 334 aaKnown RBP8.6□□□□□ -1.03
COMMD4-203ENST00000480484 KBTBD11O94819 623 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 IGKV1-13P0DP09 117 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 BMP5P22003 454 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 MRPS11P82912 194 aaKnown RBP8.6□□□□□ -1.03
COMMD4-203ENST00000480484 ENDOGQ14249 297 aaKnown RBP8.6□□□□□ -1.03
COMMD4-203ENST00000480484 NMSQ5H8A3 153 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 KMT5CQ86Y97 462 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 KIR2DL5AQ8N109 375 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 OR1K1Q8NGR3 316 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 MRPL30Q8TCC3 161 aaKnown RBP8.6□□□□□ -1.03
COMMD4-203ENST00000480484 RAB1CQ92928 201 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 SLC25A22Q9H936 323 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 TAAR3PQ9P1P4 343 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 MRPS18CQ9Y3D5 142 aaKnown RBP8.6□□□□□ -1.03
COMMD4-203ENST00000480484 IGLV3-12A0A075B6K2 115 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 GRIFINA4D1Z8 144 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 TRAPPC6AO75865 159 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 SCTP09683 121 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 DEFA4P12838 97 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 TCN2P20062 427 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 HIST1H3AP68431 136 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 PATZ1Q9HBE1 687 aaKnown RBP8.6□□□□□ -1.03
COMMD4-203ENST00000480484 DNAJC13O75165 2243 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 SVILO95425 2214 aa8.6□□□□□ -1.03
COMMD4-203ENST00000480484 IGHV3-64DA0A0J9YX35 117 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 PDCD6O75340 191 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 CCL2P13500 99 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 ARL16Q0P5N6 197 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 MBD3L1Q8WWY6 194 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 SPSB1Q96BD6 273 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 OR51B6Q9H340 312 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 RNF115Q9Y4L5 304 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 A0A0U1RRA0 63 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 UBE2L5PA0A1B0GUS4 154 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 BRI3O95415 125 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 GYPAP02724 150 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 BRS3P32247 399 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 PSMB3P49720 205 aa8.59□□□□□ -1.03
COMMD4-203ENST00000480484 PLPPR5Q32ZL2 321 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms