RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CCDC144NLQ6NUI1 221 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 DRAM1Q8N682 238 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 AQP10Q96PS8 301 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 SELENOHQ8IZQ5 122 aaKnown RBP12.11□□□□□ -0.47
NPHP4-208ENST00000478423 C12orf57Q99622 126 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 MARCH11A6NNE9 402 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
NPHP4-208ENST00000478423 FAM157CP0CG43 387 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 RPL27AP46776 148 aaKnown RBP12.11□□□□□ -0.47
NPHP4-208ENST00000478423 OR8I2Q8N0Y5 310 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
NPHP4-208ENST00000478423 TSC2P49815 1807 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 A0A0B4J293 547 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 HKR1P10072 659 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 MC5RP33032 325 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 SNRPEP62304 92 aaKnown RBP12.11□□□□□ -0.47
NPHP4-208ENST00000478423 ZIC4Q8N9L1 334 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 LINC01560Q8TB33 94 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 WBP1Q96G27 269 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 RNF212Q495C1 297 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
NPHP4-208ENST00000478423 TP53RKQ96S44 253 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 ERVH48-1M5A8F1 160 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 CLPSP04118 112 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 FABP4P15090 132 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 TMEM187Q14656 261 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 MUC15Q8N387 334 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 ANAPC1Q9H1A4 1944 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 H3BQ15 152 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 F12P00748 615 aaPredicted RBP12.1□□□□□ -0.47
NPHP4-208ENST00000478423 DLK1P80370 383 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 FAM201AQ5SY85 155 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 MEGF10Q96KG7 1140 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 OR4C12Q96R67 309 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 NRIP2Q9BQI9 281 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 WDR61Q9GZS3 305 aaKnown RBP12.1□□□□□ -0.47
NPHP4-208ENST00000478423 TUBD1Q9UJT1 453 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 JPT1Q9UK76 154 aa12.1□□□□□ -0.47
NPHP4-208ENST00000478423 S1PR2O95136 353 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 DHRS7BQ6IAN0 325 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 IDI2-AS1Q9NZ38 188 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 IL36RNQ9UBH0 155 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 FANCMQ8IYD8 2048 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 IGHV2OR16-5A0A0B4J2B6 119 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 SNRPCP09234 159 aaKnown RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 RD3LP0DJH9 198 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 CD40P25942 277 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 FOXG1P55316 489 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 RPL8P62917 257 aaKnown RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 KLRB1Q12918 225 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 OR2T10Q8NGZ9 312 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 AURKAIP1Q9NWT8 199 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 FCN1O00602 326 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 MUC1P15941 1255 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 CAMPP49913 170 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 ZP1P60852 638 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 OR10G8Q8NGN5 311 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 Q8WTZ3 238 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 RBKSQ9H477 322 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 TMEM140Q9NV12 185 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 PHOX2AO14813 284 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 ARF6P62330 175 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 BMPERQ8N8U9 685 aa12.09□□□□□ -0.47
NPHP4-208ENST00000478423 LYRM2Q9NU23 88 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-208ENST00000478423 SLC25A17O43808 307 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 CRYBA1P05813 215 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 SRP14P37108 136 aaKnown RBP12.08□□□□□ -0.48
NPHP4-208ENST00000478423 TCL1AP56279 114 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 TNFRSF9Q07011 255 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 HCP5Q6MZN7 132 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 FGFBP3Q8TAT2 258 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 SOSTQ9BQB4 213 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 KIAA1324LA8MWY0 1029 aaPredicted RBP12.08□□□□□ -0.48
NPHP4-208ENST00000478423 OR10J1P30954 320 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 ECSCRQ19T08 205 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 C10orf113Q5VZT2 155 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 ZNF880Q6PDB4 577 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 TOLLIPQ9H0E2 274 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 KRTDAPP60985 99 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 HIST1H3AP68431 136 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 FAM162BQ5T6X4 162 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 ACP7Q6ZNF0 438 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 POC1AQ8NBT0 407 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 LILRB1Q8NHL6 650 aaPredicted RBP12.08□□□□□ -0.48
NPHP4-208ENST00000478423 FAM57AQ8TBR7 257 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 TAF15Q92804 592 aaKnown RBP eCLIP12.08□□□□□ -0.48
NPHP4-208ENST00000478423 PXMP4Q9Y6I8 212 aa12.08□□□□□ -0.48
NPHP4-208ENST00000478423 IGHV1-69-2A0A0G2JMI3 117 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 ZG16O60844 167 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 HSPE1P61604 102 aaKnown RBP12.07□□□□□ -0.48
NPHP4-208ENST00000478423 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
NPHP4-208ENST00000478423 C2orf68Q2NKX9 166 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 FAM222BQ8WU58 562 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms