RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
RRP1-201ENST00000467112 C11orf94C9JXX5 98 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 GGCTO75223 188 aaKnown RBP12.53□□□□□ -0.4
RRP1-201ENST00000467112 MBP02144 154 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 GRPP07492 148 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 CELA3BP08861 270 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 P0C879 139 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 SSX2Q16385 188 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 ATP6V1FQ16864 119 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 C6orf15Q6UXA7 325 aaPredicted RBP12.53□□□□□ -0.4
RRP1-201ENST00000467112 C2orf88Q9BSF0 95 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 OR2J1Q9GZK6 312 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 COL6A3P12111 3177 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 B4E171 279 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 SH2D1BO14796 132 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 GCGP01275 180 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 TSPAN7P41732 249 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 GCSAMLQ5JQS6 135 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 MRPL41Q8IXM3 137 aaKnown RBP12.53□□□□□ -0.4
RRP1-201ENST00000467112 TMEM251Q8N6I4 163 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 ZNF709Q8N972 641 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 NOL4LQ96MY1 436 aaPredicted RBP12.53□□□□□ -0.4
RRP1-201ENST00000467112 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 WASF3Q9UPY6 502 aa12.53□□□□□ -0.4
RRP1-201ENST00000467112 C12orf77C9JDV5 145 aa12.52□□□□□ -0.4
RRP1-201ENST00000467112 OR4A8P0C604 315 aa12.52□□□□□ -0.4
RRP1-201ENST00000467112 MPLP40238 635 aa12.52□□□□□ -0.4
RRP1-201ENST00000467112 UBE2G2P60604 165 aa12.52□□□□□ -0.4
RRP1-201ENST00000467112 Q3ZCU0 254 aa12.52□□□□□ -0.4
RRP1-201ENST00000467112 FAM78BQ5VT40 261 aa12.52□□□□□ -0.4
RRP1-201ENST00000467112 POLDIP2Q9Y2S7 368 aa12.52□□□□□ -0.4
RRP1-201ENST00000467112 MED13Q9UHV7 2174 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 ST8SIA5O15466 376 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 TFF1P04155 84 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 ZNF146Q15072 292 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 OR1C1Q15619 314 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 ABHD17BQ5VST6 288 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 LINC00696Q6ZRV3 163 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 TMEM105Q8N8V8 129 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 TMEM18Q96B42 140 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 GALMQ96C23 342 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 DERL1Q9BUN8 251 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 DDA1Q9BW61 102 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 TRIOBPQ9H2D6 2365 aa12.52□□□□□ -0.41
RRP1-201ENST00000467112 A0A1B0GUS0 222 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 RAC2P15153 192 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 CXorf67Q86X51 503 aaPredicted RBP12.51□□□□□ -0.41
RRP1-201ENST00000467112 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 Q8IYB0 196 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 LOXL2Q9Y4K0 774 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 HAND1O96004 215 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 IL3RAP26951 378 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 CDC34P49427 236 aaPredicted RBP12.51□□□□□ -0.41
RRP1-201ENST00000467112 PLGLB1Q02325 96 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 AESQ08117 197 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 ACOT6Q3I5F7 207 aaPredicted RBP12.51□□□□□ -0.41
RRP1-201ENST00000467112 DBX2Q6ZNG2 339 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 CISD2Q8N5K1 135 aaKnown RBP12.51□□□□□ -0.41
RRP1-201ENST00000467112 KNTC1P50748 2209 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 TRAV38-1A0A0B4J264 116 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 SRP14P37108 136 aaKnown RBP12.51□□□□□ -0.41
RRP1-201ENST00000467112 ATP5G3P48201 142 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 SLC10A1Q14973 349 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
RRP1-201ENST00000467112 BCL2L2Q92843 193 aaPredicted RBP12.51□□□□□ -0.41
RRP1-201ENST00000467112 WNT9BO14905 357 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 EREGO14944 169 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 VENTXO95231 258 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 HBZP02008 142 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 TYMSP04818 313 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 CNN1P51911 297 aaKnown RBP12.5□□□□□ -0.41
RRP1-201ENST00000467112 GNB1P62873 340 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 PAX5Q02548 391 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 EIF4EBP1Q13541 118 aaPredicted RBP12.5□□□□□ -0.41
RRP1-201ENST00000467112 CST9LP1Q5W188 147 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 LURAP1Q96LR2 239 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 PRR14LQ5THK1 2151 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 KCNIP4Q6PIL6 250 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 ZNF826PQ6ZT77 177 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 TP53TG5Q9Y2B4 290 aa12.5□□□□□ -0.41
RRP1-201ENST00000467112 A0A0U1RQK1 487 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 NDUFB4O95168 129 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
RRP1-201ENST00000467112 C1QTNF9P0C862 333 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 CATR1Q13166 79 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 LBHQ53QV2 105 aaPredicted RBP12.49□□□□□ -0.41
RRP1-201ENST00000467112 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 MRGPRDQ8TDS7 321 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 MRPL37Q9BZE1 423 aaKnown RBP12.49□□□□□ -0.41
RRP1-201ENST00000467112 KMT2EQ8IZD2 1858 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 IGHV3-43A0A0B4J1X8 118 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 TMEM30CPA0ZSE6 113 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 LINC00473A8K010 186 aa12.49□□□□□ -0.41
RRP1-201ENST00000467112 MLNRO43193 412 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms