RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 Q8N402 240 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 OR13C3Q8NGS6 347 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 CT45A3Q8NHU0 189 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 RGP1Q92546 391 aaPredicted RBP11.04□□□□□ -0.64
CXCR4-203ENST00000466288 TUBA4BQ9H853 241 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 CKLFQ9UBR5 152 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 FOXA2Q9Y261 457 aaPredicted RBP11.04□□□□□ -0.64
CXCR4-203ENST00000466288 ORC5O43913 435 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 IGHV3-11P01762 117 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 CD37P11049 281 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 ELK1P19419 428 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 FSTP19883 344 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 CRIP2P52943 208 aaPredicted RBP11.03□□□□□ -0.64
CXCR4-203ENST00000466288 MRPS10P82664 201 aaKnown RBP11.03□□□□□ -0.64
CXCR4-203ENST00000466288 ECSCRQ19T08 205 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 UBE2NLQ5JXB2 153 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 LIN54Q6MZP7 749 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 LINC00322Q6ZN03 302 aaPredicted RBP11.03□□□□□ -0.64
CXCR4-203ENST00000466288 SAMD12Q8N8I0 201 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 OR13C5Q8NGS8 318 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 OR10K1Q8NGX5 313 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 IFT22Q9H7X7 185 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 ETAA1Q9NY74 926 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 EXTL2Q9UBQ6 330 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 TNCP24821 2201 aa11.03□□□□□ -0.64
CXCR4-203ENST00000466288 hCG_2014768A0A024R1R8 64 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 ARPC1BO15143 372 aaKnown RBP11.02□□□□□ -0.65
CXCR4-203ENST00000466288 NBR2O15453 112 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 MAGEB3O15480 346 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 SLC25A17O43808 307 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 LANCL1O43813 399 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 LY6G6CO95867 125 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 OR10A3P58181 314 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 BAK1Q16611 211 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 SNX29P2Q8IUI4 249 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 CCDC107Q8WV48 283 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 DEDD2Q8WXF8 326 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 DDB2Q92466 427 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 TMEM106AQ96A25 262 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 NABP2Q9BQ15 211 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 TBC1D24Q9ULP9 559 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 DHDHQ9UQ10 334 aa11.02□□□□□ -0.65
CXCR4-203ENST00000466288 RGS11O94810 467 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 EGR2P11161 476 aaPredicted RBP11.01□□□□□ -0.65
CXCR4-203ENST00000466288 INPP1P49441 399 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 IL34Q6ZMJ4 242 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 LRRTM1Q86UE6 522 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 NPBQ8NG41 125 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 RHOVQ96L33 236 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 ZNF251Q9BRH9 671 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 C7orf50Q9BRJ6 194 aaKnown RBP11.01□□□□□ -0.65
CXCR4-203ENST00000466288 CST11Q9H112 138 aa11.01□□□□□ -0.65
CXCR4-203ENST00000466288 AK6Q9Y3D8 172 aaKnown RBP11.01□□□□□ -0.65
CXCR4-203ENST00000466288 SMIM30A4D0T7 59 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 H0Y980 276 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 GSTZ1O43708 216 aaPredicted RBP11□□□□□ -0.65
CXCR4-203ENST00000466288 OR7C1O76099 320 aaPredicted RBP11□□□□□ -0.65
CXCR4-203ENST00000466288 NDUFA3O95167 84 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 MT-ND4P03905 459 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 GLT8D1Q68CQ7 371 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 ASCL4Q6XD76 172 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 SERPINA12Q8IW75 414 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 CDH26Q8IXH8 852 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 TCTEX1D1Q8N7M0 179 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 NKAIN3Q8N8D7 197 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 DUSP18Q8NEJ0 188 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 OR10V1Q8NGI7 309 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 OR5D14Q8NGL3 314 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 TNFAIP8L1Q8WVP5 186 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 TSEN15Q8WW01 171 aaKnown RBP11□□□□□ -0.65
CXCR4-203ENST00000466288 S100A16Q96FQ6 103 aaKnown RBP11□□□□□ -0.65
CXCR4-203ENST00000466288 ST3GAL6Q9Y274 331 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 NUBP2Q9Y5Y2 271 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 EIF4EP06730 217 aaKnown RBP11□□□□□ -0.65
CXCR4-203ENST00000466288 RSU1Q15404 277 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 NHLRC3Q5JS37 347 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 ZNF660Q6AZW8 331 aaPredicted RBP11□□□□□ -0.65
CXCR4-203ENST00000466288 ZNF497Q6ZNH5 498 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 GTSCR1Q86UQ5 136 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 GNG12Q9UBI6 72 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 STEAP1Q9UHE8 339 aa11□□□□□ -0.65
CXCR4-203ENST00000466288 A0A1W2PPK0 400 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 CENPXA8MT69 81 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 GEMIN2O14893 280 aaKnown RBP10.99□□□□□ -0.65
CXCR4-203ENST00000466288 HTR3BO95264 441 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 BRI3O95415 125 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 HNRNPCP07910 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
CXCR4-203ENST00000466288 TRAPPC2P0DI81 140 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 TRAPPC2BP0DI82 140 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 IGFBP3P17936 291 aaPredicted RBP10.99□□□□□ -0.65
CXCR4-203ENST00000466288 RBM11P57052 281 aaKnown RBP10.99□□□□□ -0.65
CXCR4-203ENST00000466288 CX3CL1P78423 397 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 ODF3L1Q8IXM7 274 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 MS4A10Q96PG2 267 aa10.99□□□□□ -0.65
CXCR4-203ENST00000466288 MRPL20Q9BYC9 149 aaKnown RBP10.99□□□□□ -0.65
CXCR4-203ENST00000466288 A0A0A6YYH2 397 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 A6NJ64 397 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 SLC17A2O00624 439 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 CSTBP04080 98 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms