RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 ZBTB25P24278 435 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 HTR2CP28335 458 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 RPS27AP62979 156 aaKnown RBP11.06□□□□□ -0.64
MCF2L-220ENST00000464800 SSBP2P81877 361 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-220ENST00000464800 DYRK1AQ13627 763 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 ACSM3Q53FZ2 586 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 LAIR2Q6ISS4 152 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 ZNF880Q6PDB4 577 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 NANOGP1Q8N7R0 232 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 ZNF383Q8NA42 475 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 USMG5Q96IX5 58 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 TMEM59Q9BXS4 323 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-220ENST00000464800 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 OR1A1Q9P1Q5 309 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 ZNF221Q9UK13 617 aa11.06□□□□□ -0.64
MCF2L-220ENST00000464800 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
MCF2L-220ENST00000464800 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
MCF2L-220ENST00000464800 GNAO1P09471 354 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
MCF2L-220ENST00000464800 CEACAM6P40199 344 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 MECP2P51608 486 aaKnown RBP11.05□□□□□ -0.64
MCF2L-220ENST00000464800 HLA-DRB3P79483 266 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 CD300EQ496F6 205 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-220ENST00000464800 C1orf100Q5SVJ3 147 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 AHSA2Q719I0 299 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 LRRTM1Q86UE6 522 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 DEFB125Q8N687 156 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 PACRGLQ8N7B6 248 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 KCNG3Q8TAE7 436 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 SNAPC3Q92966 411 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 SRD5A3Q9H8P0 318 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 C8orf4Q9NR00 106 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 PLCXD1Q9NUJ7 323 aa11.05□□□□□ -0.64
MCF2L-220ENST00000464800 PROP1O75360 226 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 LY6G6CO95867 125 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 CD7P09564 240 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 LINC00205P59089 165 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 PJVKQ0ZLH3 352 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 UNC119Q13432 240 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 GLT8D1Q68CQ7 371 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 C8orf59Q8N0T1 100 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-220ENST00000464800 MS4A15Q8N5U1 240 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 BPIFB6Q8NFQ5 453 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 DYNLRB2Q8TF09 96 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 PTX4Q96A99 478 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 PHB2Q99623 299 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 NICN1Q9BSH3 213 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 TM2D1Q9BX74 207 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 RIMS4Q9H426 269 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-220ENST00000464800 KCNK15Q9H427 330 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 SLC35D1Q9NTN3 355 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 PLEKHJ1Q9NW61 149 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 MGAT4AQ9UM21 535 aa11.04□□□□□ -0.64
MCF2L-220ENST00000464800 TRBV6-6A0A0A6YYG2 114 aa11.03□□□□□ -0.64
MCF2L-220ENST00000464800 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
MCF2L-220ENST00000464800 M0R1X1 148 aa11.03□□□□□ -0.64
MCF2L-220ENST00000464800 IGLV2-23P01705 113 aa11.03□□□□□ -0.64
MCF2L-220ENST00000464800 RBM48Q5RL73 367 aaKnown RBP11.03□□□□□ -0.64
MCF2L-220ENST00000464800 FBLIM1Q8WUP2 373 aa11.03□□□□□ -0.64
MCF2L-220ENST00000464800 PHYHIPQ92561 330 aa11.03□□□□□ -0.64
MCF2L-220ENST00000464800 HARBI1Q96MB7 349 aa11.03□□□□□ -0.64
MCF2L-220ENST00000464800 A0A0A6YYD4 124 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 TMEM14DPA8MWL7 114 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 BMPR1BO00238 502 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 EBAG9O00559 213 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 CRYGBP07316 175 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 APELAP0DMC3 54 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 CD37P11049 281 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 SRMP19623 302 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 QRFPP83859 136 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 CBX3Q13185 183 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 EXOSC2Q13868 293 aaKnown RBP11.02□□□□□ -0.65
MCF2L-220ENST00000464800 GUCA2BQ16661 112 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 CEACAM19Q7Z692 300 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-220ENST00000464800 HDHD3Q9BSH5 251 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-220ENST00000464800 FKBP14Q9NWM8 211 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 AK3Q9UIJ7 227 aa11.02□□□□□ -0.65
MCF2L-220ENST00000464800 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 ZNF785A8K8V0 405 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 SOCS1O15524 211 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 RBMXL2O75526 392 aaKnown RBP11.01□□□□□ -0.65
MCF2L-220ENST00000464800 SCTP09683 121 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 OR9G9P0C7N8 305 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 HSD17B12Q53GQ0 312 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 ADAD2Q8NCV1 583 aaKnown RBP11.01□□□□□ -0.65
MCF2L-220ENST00000464800 C12orf4Q9NQ89 552 aa11.01□□□□□ -0.65
MCF2L-220ENST00000464800 CXorf65A6NEN9 183 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 NUPR2A6NF83 97 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 SHOXO15266 292 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 MPPED1O15442 326 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 BPNT1O95861 308 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 CDK1P06493 297 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 RHOGP84095 191 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 DEFB114Q30KQ6 69 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 OR6M1Q8NGM8 313 aa11□□□□□ -0.65
MCF2L-220ENST00000464800 DDB2Q92466 427 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms