RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SCELO95171 688 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 BRI3O95415 125 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 RAB36O95755 333 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 GCGP01275 180 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 HLA-DQB1P01920 261 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 ORM1P02763 201 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 DCNP07585 359 aaKnown RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR13C7P0DN81 318 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 HIST1H1CP16403 213 aaKnown RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MYL12AP19105 171 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 GZMHP20718 246 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 S100A7P31151 101 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 CD70P32970 193 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 DNASE1L1P49184 302 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 CLDN6P56747 220 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR10A3P58181 314 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TAS2R43P59537 309 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 GABARAPL2P60520 117 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SELENOWP63302 87 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 DCDP81605 110 aaKnown RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 CDK6Q00534 326 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MLLT11Q13015 90 aaPredicted RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SKP2Q13309 424 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 HTR4Q13639 388 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SHHQ15465 462 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SURF2Q15527 256 aaPredicted RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 HMGN3Q15651 99 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 PRSS8Q16651 343 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM128Q5BJH2 165 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 Q5BKY6 102 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 RNASE13Q5GAN3 156 aaKnown RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 PYY3Q5JQD4 70 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 FAHD1Q6P587 224 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF773Q6PK81 442 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 CASP12Q6UXS9 341 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 ASCL4Q6XD76 172 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 FAM183BPQ6ZVS7 135 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 FA2HQ7L5A8 372 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 DEFB128Q7Z7B8 93 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MDP1Q86V88 176 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC30A8Q8IWU4 369 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 C2orf73Q8N5S3 287 aaPredicted RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 YIPF7Q8N8F6 280 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF439Q8NDP4 499 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TSTD1Q8NFU3 115 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC26A10Q8NG04 563 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR5A2Q8NGI9 324 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR8D4Q8NGM9 314 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR13C6PQ8NH95 151 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MCFD2Q8NI22 146 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 CIRBP-AS1Q8TBR5 109 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 RXFP4Q8TDU9 374 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 RTN4IP1Q8WWV3 396 aaPredicted RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 ARL11Q969Q4 196 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MALSU1Q96EH3 234 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 PYURFQ96I23 114 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SMIM8Q96KF7 97 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SCGB3A2Q96PL1 93 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR52B2Q96RD2 323 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TP53RKQ96S44 253 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SIGMAR1Q99720 223 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 LXNQ9BS40 222 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 NUDT9Q9BW91 350 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 SNHG12Q9BXW3 62 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MS4A8Q9BY19 250 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 REG4Q9BYZ8 158 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 CHST5Q9GZS9 411 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 CST9LQ9H4G1 147 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TUBA4BQ9H853 241 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 C8orf17Q9NRJ1 99 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 LYRM2Q9NU23 88 aaPredicted RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TRAPPC2LQ9UL33 140 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TFR2Q9UP52 801 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 V9GYY9 64 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 KIF20BQ96Q89 1820 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MYO5BQ9ULV0 1848 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 DENND4BO75064 1496 aaPredicted RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 ERVK-7P63135 1459 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MYH3P11055 1940 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 KDM5CP41229 1560 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 HECW2Q9P2P5 1572 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 SCN4AP35499 1836 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 CAMSAP1Q5T5Y3 1602 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 KDM5AP29375 1690 aaKnown RBP2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 BORCS7-ASMTA0A0B4J1R7 106 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 A0A1W2PRF3 423 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 A0A1W2PRM7 423 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 SMIM9A6NGZ8 99 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 FTCDNL1E5RQL4 147 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 CORTO00230 105 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 MANBAO00462 879 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC31A1O15431 190 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 OR2T1O43869 369 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC19A2O60779 497 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 ENTPD6O75354 484 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 SC5DO75845 299 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 CDS2O95674 445 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 OXTP01178 125 aa2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 HLA-AP01891 365 aaKnown RBP2.1□□□□□ -2.07
HMGXB4-205ENST00000464480 CATP04040 527 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms