RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 PDCD6O75340 191 aa11.27□□□□□ -0.61
APP-211ENST00000462267 PROP1O75360 226 aa11.27□□□□□ -0.61
APP-211ENST00000462267 OR2C1O95371 312 aa11.27□□□□□ -0.61
APP-211ENST00000462267 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
APP-211ENST00000462267 APELAP0DMC3 54 aa11.27□□□□□ -0.61
APP-211ENST00000462267 CTRB1P17538 263 aa11.27□□□□□ -0.61
APP-211ENST00000462267 GBX2P52951 348 aaPredicted RBP11.27□□□□□ -0.61
APP-211ENST00000462267 CTRB2Q6GPI1 263 aa11.27□□□□□ -0.61
APP-211ENST00000462267 LHFPL3Q86UP9 236 aa11.27□□□□□ -0.61
APP-211ENST00000462267 SLC38A6Q8IZM9 456 aa11.27□□□□□ -0.61
APP-211ENST00000462267 UXS1Q8NBZ7 420 aa11.27□□□□□ -0.61
APP-211ENST00000462267 NECAP1Q8NC96 275 aa11.27□□□□□ -0.61
APP-211ENST00000462267 OR1L6Q8NGR2 347 aa11.27□□□□□ -0.61
APP-211ENST00000462267 FBLIM1Q8WUP2 373 aa11.27□□□□□ -0.61
APP-211ENST00000462267 CIB1Q99828 191 aa11.27□□□□□ -0.61
APP-211ENST00000462267 SELENOIQ9C0D9 397 aa11.27□□□□□ -0.61
APP-211ENST00000462267 GABARAPL1Q9H0R8 117 aa11.27□□□□□ -0.61
APP-211ENST00000462267 EXOSC1Q9Y3B2 195 aaKnown RBP11.27□□□□□ -0.61
APP-211ENST00000462267 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
APP-211ENST00000462267 TCRBV3S1A0A5B6 114 aa11.26□□□□□ -0.61
APP-211ENST00000462267 IGLL5B9A064 214 aa11.26□□□□□ -0.61
APP-211ENST00000462267 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
APP-211ENST00000462267 BAG2O95816 211 aa11.26□□□□□ -0.61
APP-211ENST00000462267 HLA-AP01891 365 aaKnown RBP11.26□□□□□ -0.61
APP-211ENST00000462267 T-ENOLP0DO92 83 aa11.26□□□□□ -0.61
APP-211ENST00000462267 MGMTP16455 207 aa11.26□□□□□ -0.61
APP-211ENST00000462267 GLIPR1L1Q6UWM5 242 aa11.26□□□□□ -0.61
APP-211ENST00000462267 ZDHHC13Q8IUH4 622 aa11.26□□□□□ -0.61
APP-211ENST00000462267 OR2C3Q8N628 320 aa11.26□□□□□ -0.61
APP-211ENST00000462267 EDARADDQ8WWZ3 215 aa11.26□□□□□ -0.61
APP-211ENST00000462267 FAM46BQ96A09 425 aa11.26□□□□□ -0.61
APP-211ENST00000462267 CYYR1Q96J86 154 aa11.26□□□□□ -0.61
APP-211ENST00000462267 Q96M66 194 aa11.26□□□□□ -0.61
APP-211ENST00000462267 GABARAPL3Q9BY60 117 aa11.26□□□□□ -0.61
APP-211ENST00000462267 BANF2Q9H503 90 aa11.26□□□□□ -0.61
APP-211ENST00000462267 TMEM213A2RRL7 107 aa11.25□□□□□ -0.61
APP-211ENST00000462267 SNTNA6NMZ2 147 aa11.25□□□□□ -0.61
APP-211ENST00000462267 A8MWP6 167 aa11.25□□□□□ -0.61
APP-211ENST00000462267 RTL8CO15255 209 aa11.25□□□□□ -0.61
APP-211ENST00000462267 MPPED1O15442 326 aa11.25□□□□□ -0.61
APP-211ENST00000462267 LINC00205P59089 165 aa11.25□□□□□ -0.61
APP-211ENST00000462267 FLOT2Q14254 428 aa11.25□□□□□ -0.61
APP-211ENST00000462267 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
APP-211ENST00000462267 MEDAGQ5VYS4 303 aa11.25□□□□□ -0.61
APP-211ENST00000462267 OR4A47Q6IF82 309 aa11.25□□□□□ -0.61
APP-211ENST00000462267 RBPMS2Q6ZRY4 209 aaKnown RBP11.25□□□□□ -0.61
APP-211ENST00000462267 MUL1Q969V5 352 aa11.25□□□□□ -0.61
APP-211ENST00000462267 LGALS12Q96DT0 336 aa11.25□□□□□ -0.61
APP-211ENST00000462267 C11orf54Q9H0W9 315 aaPredicted RBP11.25□□□□□ -0.61
APP-211ENST00000462267 C11orf68Q9H3H3 251 aaKnown RBP11.25□□□□□ -0.61
APP-211ENST00000462267 IMPAD1Q9NX62 359 aa11.25□□□□□ -0.61
APP-211ENST00000462267 ZNF320A2RRD8 509 aa11.24□□□□□ -0.61
APP-211ENST00000462267 PRH1P02810 166 aa11.24□□□□□ -0.61
APP-211ENST00000462267 CALB2P22676 271 aa11.24□□□□□ -0.61
APP-211ENST00000462267 C15orf32Q32M92 178 aa11.24□□□□□ -0.61
APP-211ENST00000462267 HSP90B2PQ58FF3 399 aa11.24□□□□□ -0.61
APP-211ENST00000462267 GLT8D1Q68CQ7 371 aa11.24□□□□□ -0.61
APP-211ENST00000462267 BTNL8Q6UX41 500 aa11.24□□□□□ -0.61
APP-211ENST00000462267 RARRES2Q99969 163 aa11.24□□□□□ -0.61
APP-211ENST00000462267 THTPAQ9BU02 230 aa11.24□□□□□ -0.61
APP-211ENST00000462267 MAP6D1Q9H9H5 199 aa11.24□□□□□ -0.61
APP-211ENST00000462267 SLC35D1Q9NTN3 355 aa11.24□□□□□ -0.61
APP-211ENST00000462267 ZNF221Q9UK13 617 aa11.24□□□□□ -0.61
APP-211ENST00000462267 C11orf94C9JXX5 98 aa11.23□□□□□ -0.61
APP-211ENST00000462267 CRTAPO75718 401 aaPredicted RBP11.23□□□□□ -0.61
APP-211ENST00000462267 IGFBP3P17936 291 aaPredicted RBP11.23□□□□□ -0.61
APP-211ENST00000462267 CEACAM6P40199 344 aa11.23□□□□□ -0.61
APP-211ENST00000462267 MFAP2P55001 183 aa11.23□□□□□ -0.61
APP-211ENST00000462267 MED22Q15528 200 aa11.23□□□□□ -0.61
APP-211ENST00000462267 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
APP-211ENST00000462267 TMEM177Q53S58 311 aa11.23□□□□□ -0.61
APP-211ENST00000462267 AWAT2Q6E213 333 aa11.23□□□□□ -0.61
APP-211ENST00000462267 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
APP-211ENST00000462267 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
APP-211ENST00000462267 MARC2Q969Z3 335 aa11.23□□□□□ -0.61
APP-211ENST00000462267 PTX4Q96A99 478 aa11.23□□□□□ -0.61
APP-211ENST00000462267 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
APP-211ENST00000462267 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
APP-211ENST00000462267 ERVK13-1Q9NX77 482 aa11.23□□□□□ -0.61
APP-211ENST00000462267 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
APP-211ENST00000462267 ZBTB25P24278 435 aa11.22□□□□□ -0.61
APP-211ENST00000462267 FCGR2BP31994 310 aaPredicted RBP11.22□□□□□ -0.61
APP-211ENST00000462267 GTF2A1P52655 376 aaPredicted RBP11.22□□□□□ -0.61
APP-211ENST00000462267 SNRPGP62308 76 aaKnown RBP11.22□□□□□ -0.61
APP-211ENST00000462267 ATP6AP1Q15904 470 aa11.22□□□□□ -0.61
APP-211ENST00000462267 TNXAQ16473 311 aa11.22□□□□□ -0.61
APP-211ENST00000462267 ZNF880Q6PDB4 577 aa11.22□□□□□ -0.61
APP-211ENST00000462267 JAGN1Q8N5M9 183 aa11.22□□□□□ -0.61
APP-211ENST00000462267 ORAI1Q96D31 301 aa11.22□□□□□ -0.61
APP-211ENST00000462267 GALNT14Q96FL9 552 aa11.22□□□□□ -0.61
APP-211ENST00000462267 ZNF446Q9NWS9 450 aa11.22□□□□□ -0.61
APP-211ENST00000462267 CKLFQ9UBR5 152 aa11.22□□□□□ -0.61
APP-211ENST00000462267 UBQLN2Q9UHD9 624 aa11.22□□□□□ -0.61
APP-211ENST00000462267 M0R1X1 148 aa11.21□□□□□ -0.61
APP-211ENST00000462267 OR2J3O76001 311 aa11.21□□□□□ -0.61
APP-211ENST00000462267 SCTP09683 121 aa11.21□□□□□ -0.61
APP-211ENST00000462267 C8orf88P0DMB2 117 aa11.21□□□□□ -0.61
APP-211ENST00000462267 ARL3P36405 182 aa11.21□□□□□ -0.61
APP-211ENST00000462267 PRSS8Q16651 343 aa11.21□□□□□ -0.61
APP-211ENST00000462267 CCDC58Q4VC31 144 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms