RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CECR9P0C854 216 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 CD99P14209 185 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 DAOP14920 347 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 FGF7P21781 194 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 MPV17P39210 176 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 KIR2DL2P43627 348 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 ATP5IP56385 69 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 SELENOVP59797 346 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 SPCS3P61009 180 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 TMEM241Q24JQ0 296 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 NCR3LG1Q68D85 454 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 OR8G2PQ6IF36 304 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 BHLHA15Q7RTS1 189 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 PIP4P1Q86T03 277 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 HAPLN4Q86UW8 402 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 OR10G9Q8NGN4 311 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 OR10G7Q8NGN6 311 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 MBD3L2Q8NHZ7 208 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 Q8WTZ3 238 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 FAM210BQ96KR6 192 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 SMIM7Q9BQ49 75 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF665Q9H7R5 613 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 GAR1Q9NY12 217 aaKnown RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 MYO7BQ6PIF6 2116 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 USP24Q9UPU5 2620 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 IGHV2OR16-5A0A0B4J2B6 119 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 TRGV8A0A0C4DH27 118 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 MED19A0JLT2 244 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-202ENST00000459727 MARCH11A6NNE9 402 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 FNDC10F2Z333 226 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 S1PR2O95136 353 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 FABP1P07148 127 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 NQO2P16083 231 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 PRDX2P32119 198 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 G6PCP35575 357 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 ELLP55199 621 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-202ENST00000459727 ERVS71-1P61550 626 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 COL10A1Q03692 680 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 AESQ08117 197 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 ARL16Q0P5N6 197 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF816Q0VGE8 651 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-202ENST00000459727 RAB31Q13636 194 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 FFAR4Q5NUL3 377 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 TIMM23BQ5SRD1 257 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 KCNIP4Q6PIL6 250 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 C11orf53Q8IXP5 236 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 GCNT2Q8N0V5 402 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 ZADH2Q8N4Q0 377 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 OR52L2PQ8NGH6 319 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 OR4S2Q8NH73 311 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 NANPQ8TBE9 248 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 MRGPRDQ8TDS7 321 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 LRRC29Q8WV35 223 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 CORO2AQ92828 525 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 S100PBPQ96BU1 408 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 R3HDM4Q96D70 268 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 NEIL1Q96FI4 390 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-202ENST00000459727 COQ2Q96H96 371 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 TMEM204Q9BSN7 226 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF71Q9NQZ8 489 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-202ENST00000459727 GNG12Q9UBI6 72 aa7.4□□□□□ -1.22
HDAC3-202ENST00000459727 MED12Q93074 2177 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 C15orf65H3BRN8 121 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 H7BYZ3 331 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 F2RL2O00254 374 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 CEACAM4O75871 244 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 MT-CO2P00403 227 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 IGHV3-13P01766 116 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 CRYAAP02489 173 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 MDKP21741 143 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-202ENST00000459727 TNFSF4P23510 183 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 SRP14P37108 136 aaKnown RBP7.39□□□□□ -1.23
HDAC3-202ENST00000459727 CDC34P49427 236 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-202ENST00000459727 CCL11P51671 97 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 TMPRSS3P57727 454 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 FAM3BP58499 235 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-202ENST00000459727 ZNF726P1Q15940 193 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 BSXQ3C1V8 233 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 Q3ZCU0 254 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 PRAMEF5Q5TYX0 476 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 PRAMEF6Q5VXH4 476 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 WDR25Q64LD2 544 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-202ENST00000459727 MYPOPQ86VE0 399 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-202ENST00000459727 ZNF808Q8N4W9 903 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-202ENST00000459727 C9orf106Q8NAJ2 232 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 FDCSPQ8NFU4 85 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 OR10A7Q8NGE5 316 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 OR4A16Q8NH70 328 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 IMMP2LQ96T52 175 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 S1PR3Q99500 378 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 SFXN3Q9BWM7 321 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 NPCDR1Q9BY65 106 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 FAM234AQ9H0X4 552 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 SRD5A3Q9H8P0 318 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 NIT2Q9NQR4 276 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 PITPNC1Q9UKF7 332 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 WDR83OSQ9Y284 106 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 ARL2-SNX15V9GYD0 113 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 CEP250Q9BV73 2442 aa7.39□□□□□ -1.23
HDAC3-202ENST00000459727 TRAV39A0A0B4J263 110 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms