RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
LINC00959-201ENST00000456581 TNFSF13O75888 250 aa10.42□□□□□ -0.74
LINC00959-201ENST00000456581 ZNF816Q0VGE8 651 aaPredicted RBP10.42□□□□□ -0.74
LINC00959-201ENST00000456581 IGF2-ASQ6U949 168 aa10.42□□□□□ -0.74
LINC00959-201ENST00000456581 C1orf87Q8N0U7 546 aa10.42□□□□□ -0.74
LINC00959-201ENST00000456581 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
LINC00959-201ENST00000456581 CLN8Q9UBY8 286 aa10.42□□□□□ -0.74
LINC00959-201ENST00000456581 MPC1Q9Y5U8 109 aa10.42□□□□□ -0.74
LINC00959-201ENST00000456581 DEGS1O15121 323 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 KRASP01116 189 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 GRPP07492 148 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 MDH2P40926 338 aaKnown RBP10.41□□□□□ -0.74
LINC00959-201ENST00000456581 CD81P60033 236 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 BTNL3Q6UXE8 466 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 Q6ZS49 121 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 ZNF573Q86YE8 665 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 SAXO1Q8IYX7 474 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 SMDT1Q9H4I9 107 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 TRAPPC2LQ9UL33 140 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 CDIPTO14735 213 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 DDTP30046 118 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 G6PCP35575 357 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 ZNF826PQ6ZT77 177 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 OR8G5Q8NG78 346 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 STARD4Q96DR4 205 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 OR51I2Q9H344 312 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 OPA3Q9H6K4 179 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 SDF2L1Q9HCN8 221 aa10.41□□□□□ -0.74
LINC00959-201ENST00000456581 PGPEP1LA6NFU8 196 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 ZNF737O75373 536 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 DFFBO76075 338 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 CLDN1O95832 211 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 HBE1P02100 147 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 AMBPP02760 352 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 CEACAM6P40199 344 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 FABP6P51161 128 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 GNB2P62879 340 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 SSX9Q7RTT3 188 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 C16orf82Q7Z2V1 217 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 ZNF664Q8N3J9 261 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 TPRX1Q8N7U7 411 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 RBMXL3Q8N7X1 1067 aaKnown RBP10.4□□□□□ -0.74
LINC00959-201ENST00000456581 TMEM37Q8WXS4 190 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 C5orf30Q96GV9 206 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 SMIM7Q9BQ49 75 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 GFOD1Q9NXC2 390 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 CISD1Q9NZ45 108 aaKnown RBP10.4□□□□□ -0.74
LINC00959-201ENST00000456581 CLDN34H7C241 214 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 OR2H2O95918 312 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 CYB5R3P00387 301 aaPredicted RBP10.4□□□□□ -0.74
LINC00959-201ENST00000456581 TFF3Q07654 80 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 MRPL49Q13405 166 aaKnown RBP10.4□□□□□ -0.74
LINC00959-201ENST00000456581 SCCPDHQ8NBX0 429 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 KLF14Q8TD94 323 aaPredicted RBP10.4□□□□□ -0.74
LINC00959-201ENST00000456581 LHX4Q969G2 390 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 PCGF1Q9BSM1 259 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 LAMP3Q9UQV4 416 aa10.4□□□□□ -0.74
LINC00959-201ENST00000456581 COL6A6A6NMZ7 2263 aa10.4□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A10PA6NDY2 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A18PA6NE21 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A16PA6NEW6 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A20PA6NIJ5 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A8PA6NJQ4 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A7PA6NKC0 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 ZNF705GA8MUZ8 300 aaPredicted RBP10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A22PA8MWA6 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A12PA8MX19 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A5PA8MXJ8 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A23PA8MXZ1 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 GFRA3O60609 400 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A15PP0C7V4 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A13PP0C7W8 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A14PP0C7W9 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM90A24PP0C7X0 464 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 CECR9P0C854 216 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 GZMBP10144 247 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 DRAM1Q8N682 238 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 GTF3AQ92664 365 aaKnown RBP10.39□□□□□ -0.75
LINC00959-201ENST00000456581 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 SIRT7Q9NRC8 400 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 CSMD1Q96PZ7 3565 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 OR5B21A6NL26 309 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 WNT9BO14905 357 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 RPL30P62888 115 aaKnown RBP10.39□□□□□ -0.75
LINC00959-201ENST00000456581 LRRC75BQ2VPJ9 315 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 GCSAMLQ5JQS6 135 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 Q6P435 159 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FIP1L1Q6UN15 594 aaKnown RBP10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FGFRL1Q8N441 504 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 OR1L1Q8NH94 360 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 RAB40CQ96S21 281 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 WDR61Q9GZS3 305 aaKnown RBP10.39□□□□□ -0.75
LINC00959-201ENST00000456581 TNCP24821 2201 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 PTBP3O95758 552 aaKnown RBP10.39□□□□□ -0.75
LINC00959-201ENST00000456581 COX5AP20674 150 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 SLC38A11Q08AI6 406 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 TMEM204Q9BSN7 226 aa10.39□□□□□ -0.75
LINC00959-201ENST00000456581 FAM215AQ9Y5M1 114 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms