RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 CEACAM4O75871 244 aa10.93□□□□□ -0.66
AC006001.3-201ENST00000449307 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
AC006001.3-201ENST00000449307 GLIPR1P48060 266 aa10.93□□□□□ -0.66
AC006001.3-201ENST00000449307 PPP1R27Q86WC6 154 aa10.93□□□□□ -0.66
AC006001.3-201ENST00000449307 BPIFA4PQ86YQ2 179 aa10.93□□□□□ -0.66
AC006001.3-201ENST00000449307 QTRT1Q9BXR0 403 aaKnown RBP10.93□□□□□ -0.66
AC006001.3-201ENST00000449307 PXMP4Q9Y6I8 212 aa10.93□□□□□ -0.66
AC006001.3-201ENST00000449307 APCSP02743 223 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 CLEC19AQ6UXS0 136 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 NPVFQ9HCQ7 196 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 AMY1AP04745 511 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 SMIM18P0DKX4 95 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 MRPL30Q8TCC3 161 aaKnown RBP10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 TMEM186Q96B77 213 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 NAT8Q9UHE5 227 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 KLHDC2Q9Y2U9 406 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 ISLRO14498 428 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 SPNP16150 400 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 ZNF343Q6P1L6 599 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 CD300LDQ6UXZ3 194 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 DUXBA0A1W2PPF3 345 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 RPL29P47914 159 aaKnown RBP10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 ZNF703Q9H7S9 590 aaPredicted RBP10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 A0A0U1RQV5 110 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 ZIC3O60481 467 aa10.92□□□□□ -0.66
AC006001.3-201ENST00000449307 COL11A2P13942 1736 aaPredicted RBP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 OR4C45A6NMZ5 311 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 TTRP02766 147 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 TNFSF10P50591 281 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 HLA-DRB5Q30154 266 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 PGPA6NDG6 321 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 RBFOX3A6NFN3 312 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 SRSF7Q16629 238 aaKnown RBP eCLIP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 SCARF2Q96GP6 870 aaPredicted RBP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 KLK15Q9H2R5 256 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 HSPB8Q9UJY1 196 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 SCAND1P57086 179 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 TRAV8-7A0A075B6U6 113 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 FOXI3A8MTJ6 420 aaPredicted RBP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 VSIG8P0DPA2 414 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 MVDP53602 400 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 SUMO2P61956 95 aaKnown RBP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 OR4A47Q6IF82 309 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 WDFY1Q8IWB7 410 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 GALNT14Q96FL9 552 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 DSPPQ9NZW4 1301 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 APC2O95996 2303 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 ZNF729A6NN14 1252 aaPredicted RBP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 EWSR1Q01844 656 aaKnown RBP eCLIP10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 SLC35B3Q9H1N7 401 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 ICE1Q9Y2F5 2266 aa10.91□□□□□ -0.66
AC006001.3-201ENST00000449307 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 A0A0G2JMM0 328 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 A0A1W2PPB8 328 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 A0A1W2PRS3 328 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 KIR3DP1A8MWS1 328 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 OGG1O15527 345 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 PDE6DO43924 150 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 ZNF253O75346 499 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 THBDP07204 575 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 CECR9P0C854 216 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 CHAC2Q8WUX2 184 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 ZNF430Q9H8G1 570 aaPredicted RBP10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 ANKRD20A5PA0PJZ0 165 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 DMKNQ6E0U4 476 aaPredicted RBP10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 SPSB2Q99619 263 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 FBXL15Q9H469 300 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 RBKSQ9H477 322 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 FBXL7Q9UJT9 491 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 CKS2P33552 79 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 GLRXP35754 106 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 LDLRAD2Q5SZI1 272 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 C1QTNF12Q5T7M4 302 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 FAM166AQ6J272 317 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 OR4C5Q8NGB2 326 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 OR5AU1Q8NGC0 362 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 LYNX1G3V0Z9 82 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 LYNX1P0DP58 116 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 SCMH1Q96GD3 660 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 DLL3Q9NYJ7 618 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 TRAV40A0A0B4J280 105 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 CLDN34H7C241 214 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 NGFRP08138 427 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 IER3P46695 156 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 IQCJQ1A5X6 159 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 SLC25A47Q6Q0C1 308 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 DPM3Q9P2X0 92 aa10.9□□□□□ -0.66
AC006001.3-201ENST00000449307 SAP30O75446 220 aa10.9□□□□□ -0.67
AC006001.3-201ENST00000449307 EFEMP2O95967 443 aa10.9□□□□□ -0.67
AC006001.3-201ENST00000449307 IL4P05112 153 aa10.9□□□□□ -0.67
AC006001.3-201ENST00000449307 GPR183P32249 361 aa10.9□□□□□ -0.67
AC006001.3-201ENST00000449307 C2orf83Q53S99 150 aa10.9□□□□□ -0.67
AC006001.3-201ENST00000449307 CADM3Q8N126 398 aa10.9□□□□□ -0.67
AC006001.3-201ENST00000449307 C9orf106Q8NAJ2 232 aa10.9□□□□□ -0.67
AC006001.3-201ENST00000449307 MALP21145 153 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms